CK935883

Overview
NameCK935883
Unique NameCK935883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935883 vs. ExPASy Swiss-Prot
Match: DR206_PEA (Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1 
Query:  184 YWHDI----QSGQNPTSISVVRPPTNTST-----NGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVDLLMAMNFAFIEGKYNGSSITVLGRNPVFSKMREMPVIGGSGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY 603
            Y+HDI    ++  N TS  V  P   + T     + FG I + D+P+T    +SSK VGRAQGFY   ++      ++  F  +   ++  +IT  G +P+ +K R++ V GG+G F   RG     T  F+   G+A  +  VY+  +
Sbjct:   37 YFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTKNTYTSWLSFTFV-LNSTHHQGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFE---GEAYFRLGVYIKFF 181
The following BLAST results are available for this feature:
BLAST of CK935883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR206_PEA6.457e-1231.54Disease resistance response protein 206 OS=Pisum s... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004389_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935883 ID=CK935883; Name=CK935883; organism=Citrus sinensis; type=EST; length=641bp
GGGGGGATCAAATCTCATAGAATTCGATCCATGGCTAGATTTCTTCCNNN
NNTTGCTACCCAAATCATCTTTCTCCTCTTTCTCCTCTCTTCCTTCACCA
AAATTCAAGTCCACGGCTATGCCAAGACCATGAACAAAAACCTAATGGGA
CTGAAGAAAGAAGAACTAACCCATTTTCAAACCTACTGGCACGACATCCA
AAGTGGCCAAAACCCTACTTCAATCTCAGTAGTGAGGCCACCCACAAACA
CATCAACAAACGGTTTTGGCATAATAAATATGATTGATAATCCACTCACT
GCAGGGCCAGAAATGAGCTCAAAAATGGTGGGAAGGGCACAAGGGTTTTA
TGCACTAGCTTCACAGGAAGAAGTTGACCTGTTAATGGCCATGAATTTTG
CTTTCATTGAAGGGAAATACAATGGCAGCAGCATCACTGTGCTTGGAAGA
AACCCAGTGTTTTCAAAGATGAGAGAGATGCCAGTCATTGGGGGCAGTGG
GCTTTTCAGGTTTGCAAGAGGTTATGTTCAAGCTAGAACCCACAACTTTG
ATCCGAAAACAGGGGATGCTACAGTTCAGTATAATGTCTATGTGATGCAT
TATTGATGATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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