CK935948

Overview
NameCK935948
Unique NameCK935948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAA2_ARATH (Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana GN=ASNAP2 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.169e-73
Identity = 131/187 (70.05%), Postives = 153/187 (81.82%), Query Frame = 2
Query:  167 MGDQIARXXXXXXXXXXXLNGWGLFGSKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            MGD + R           LNGWG+FGSKYEDAADL +KAANS+KLAKSWD+AG  Y+KLA+CHLK +SKH+AA AY +AA CYKK  +NEA SCLE+AVN+FC+IGRL+MAARYYKEIAE YES+   EQ I +FEKAA+ FQNEEVTTSANQC  KVAQYAA+LEQY K+I+IYE+IAR SLNNNL
Sbjct:    1 MGDHLVRAEEFEKKAEKKLNGWGIFGSKYEDAADLLEKAANSYKLAKSWDQAGKAYLKLADCHLKSDSKHDAANAYAEAAKCYKKVDTNEAASCLERAVNIFCEIGRLNMAARYYKEIAEYYESDQKFEQAIAYFEKAAEFFQNEEVTTSANQCNLKVAQYAAQLEQYEKAIKIYEDIARHSLNNNL 187          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAA_VITVI (Alpha-soluble NSF attachment protein OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.681e-68
Identity = 124/187 (66.31%), Postives = 146/187 (78.07%), Query Frame = 2
Query:  167 MGDQIARXXXXXXXXXXXLNGWGLFGSKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            M D I R           ++GWGLFGSKYEDAAD +DKAAN FKLAKSWD+AG+TYVKL+      +SKHEAAQAY DA HCYKKTS+ EAISCLEQA  +F D GR +MA +YYKEIAELYE E N EQ I++FEKAAD++Q+EE TT+ANQC  KVAQ+AA+LEQY K+I+IYE+I R SLNNNL
Sbjct:    1 MADNIQRGEEFEKKAEKKISGWGLFGSKYEDAADFYDKAANCFKLAKSWDRAGSTYVKLSTVIQSSDSKHEAAQAYADAGHCYKKTSAKEAISCLEQAAYLFLDNGRFNMAGKYYKEIAELYELEQNFEQAIIYFEKAADIYQSEEATTAANQCNAKVAQFAAQLEQYQKAIQIYEDIGRPSLNNNL 187          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAA_SOLTU (Alpha-soluble NSF attachment protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.709e-65
Identity = 123/187 (65.78%), Postives = 145/187 (77.54%), Query Frame = 2
Query:  167 MGDQIARXXXXXXXXXXXLNGWGLFGSKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            MGD IAR           L GW LFGSKYEDAADLFDKA N FKLAKSWDKAGA YVKLANCHLKL+SKHEAA AY DAAHCYKK++  EA+SCLEQAVN F DIGRL+M+ARYYKEIAELYE E N++Q I +     +   +E+V+   NQC +K+AQ++A+ E+Y K+IEI+EEIAR S+NNNL
Sbjct:    1 MGDHIARGEDFENKAEKKLGGWALFGSKYEDAADLFDKAGNCFKLAKSWDKAGAVYVKLANCHLKLDSKHEAANAYADAAHCYKKSNIKEAVSCLEQAVNFFLDIGRLNMSARYYKEIAELYEQEQNLDQAIRYAVYEINP-GSEDVSAPPNQCLKKIAQFSAQNEKYPKAIEIFEEIARHSVNNNL 186          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAA_DICDI (Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpA PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.378e-42
Identity = 85/171 (49.71%), Postives = 123/171 (71.93%), Query Frame = 2
Query:  224 NGWGLFG---SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            N + +FG   S+Y+DAA  + KAAN FK++K WD+AGA + K A C LK  SKH+AA +YV AA CYKK +  +AI+CL+ A+  + D GR +++A++ KEIAELYE+E + +Q I  ++ A+D F  E  T S++QC  K+A ++A+LE+Y KSIEIYE++A  SL+NNL
Sbjct:   22 NFFKMFGGGSSRYDDAASDYTKAANLFKMSKKWDQAGAAFQKAAECFLKGSSKHDAASSYVLAAGCYKKGNVIDAITCLKAAIEYYTDEGRFAISAKHQKEIAELYEAEGDFDQAIASYQIASDYFDGENSTVSSHQCLLKIALFSAQLERYEKSIEIYEQVAAASLDNNL 192          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAP_DROME (Soluble NSF attachment protein OS=Drosophila melanogaster GN=Snap PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40
Identity = 76/167 (45.51%), Postives = 121/167 (72.46%), Query Frame = 2
Query:  236 LFG--SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            LFG  +K EDA + + +A N FK++K+W KAG  + + A  H +  S+H+A   YVDA++CYKK     A++CL ++++++ D+GR +MAA++++ IAE+YES+ +N+ ++I  +E+AAD F+ EE  +SAN+C  KVAQYAA+LE Y K+I IYE++A  SL ++L
Sbjct:   29 LFGGSNKVEDAIECYQRAGNMFKMSKNWTKAGECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESSL 195          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAB_MOUSE (Beta-soluble NSF attachment protein OS=Mus musculus GN=Napb PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.201e-39
Identity = 76/168 (45.24%), Postives = 124/168 (73.81%), Query Frame = 2
Query:  233 GLFG--SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N L
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPL 197          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAB_HUMAN (Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.201e-39
Identity = 76/168 (45.24%), Postives = 124/168 (73.81%), Query Frame = 2
Query:  233 GLFG--SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N L
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPL 197          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAA_BOVIN (Alpha-soluble NSF attachment protein OS=Bos taurus GN=NAPA PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.201e-39
Identity = 77/168 (45.83%), Postives = 125/168 (74.40%), Query Frame = 2
Query:  233 GLFG--SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            GLFG  SK E+A +++ +AAN FK+AK+W  AG+ + + A+ HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ L
Sbjct:   30 GLFGGSSKIEEACEIYARAANMFKMAKNWSAAGSAFCQAAHVHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTNAMDSPL 197          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAB_BOVIN (Beta-soluble NSF attachment protein OS=Bos taurus GN=NAPB PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.676e-39
Identity = 76/168 (45.24%), Postives = 124/168 (73.81%), Query Frame = 2
Query:  233 GLFG--SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEI+E+I   +++N L
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIFEQIGANTMDNPL 197          
BLAST of CK935948 vs. ExPASy Swiss-Prot
Match: SNAA_RAT (Alpha-soluble NSF attachment protein OS=Rattus norvegicus GN=Napa PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.565e-39
Identity = 76/168 (45.24%), Postives = 123/168 (73.21%), Query Frame = 2
Query:  233 GLFG--SKYEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNL 727
            GLFG  SK E+A +++ +AAN FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  ++E+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ L
Sbjct:   30 GLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPL 197          
The following BLAST results are available for this feature:
BLAST of CK935948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SNAA2_ARATH2.169e-7370.05Alpha-soluble NSF attachment protein 2 OS=Arabidop... [more]
SNAA_VITVI4.681e-6866.31Alpha-soluble NSF attachment protein OS=Vitis vini... [more]
SNAA_SOLTU3.709e-6565.78Alpha-soluble NSF attachment protein OS=Solanum tu... [more]
SNAA_DICDI3.378e-4249.71Alpha-soluble NSF attachment protein OS=Dictyostel... [more]
SNAP_DROME7.043e-4045.51Soluble NSF attachment protein OS=Drosophila melan... [more]
SNAB_MOUSE1.201e-3945.24Beta-soluble NSF attachment protein OS=Mus musculu... [more]
SNAB_HUMAN1.201e-3945.24Beta-soluble NSF attachment protein OS=Homo sapien... [more]
SNAA_BOVIN1.201e-3945.83Alpha-soluble NSF attachment protein OS=Bos taurus... [more]
SNAB_BOVIN2.676e-3945.24Beta-soluble NSF attachment protein OS=Bos taurus ... [more]
SNAA_RAT4.565e-3945.24Alpha-soluble NSF attachment protein OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004388_G04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935948 ID=CK935948; Name=CK935948; organism=Citrus sinensis; type=EST; length=729bp
GGGGACTCTTGAGAACTCTTTTCCTCTTTACTTTTCCTTTCTTAGNNNNN
NCCTAACCTCTGACACTACCAATTCCCCTTTTTTTCCCGATTGTTTTATT
TTCTTCTAGTTCTTGCTCCGATTAATTCATTTCTCCGCCTATAATAAAAT
AAAATACTAAAAGAAAATGGGCGATCAGATTGCTCGAGCCGAGGAATTCG
AGAAAAAAGCGGAGAAAAAGCTTAATGGTTGGGGTTTATTCGGCTCCAAG
TACGAAGACGCCGCCGATCTCTTCGATAAAGCCGCCAATTCCTTCAAGCT
CGCCAAATCATGGGATAAAGCTGGAGCAACTTATGTTAAGTTGGCAAACT
GTCATTTAAAGTTGGAAAGCAAACATGAAGCTGCTCAAGCTTATGTTGAT
GCTGCCCACTGCTATAAGAAAACATCTTCAAATGAGGCCATATCTTGCTT
AGAACAGGCTGTAAATATGTTTTGTGACATTGGAAGGCTCAGTATGGCTG
CAAGATATTATAAGGAAATTGCTGAGCTGTATGAATCTGAGCACAACATT
GAACAGACTATTGTTTTCTTTGAGAAGGCAGCTGATATGTTCCAAAATGA
AGAAGTAACAACTTCTGCTAACCAGTGCAAGCAGAAAGTTGCACAATATG
CTGCTGAATTGGAACAATATCACAAGTCAATTGAGATTTATGAAGAGATT
GCTAGGCAGTCTCTCAACAACAACTTGTT
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