GE213230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.292e-23 Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = -1 Query: 22 QRMAIGMILAIFTMIISGIIEDKRRYLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAAXXXXXXXXXXLCAKWY 480 QR+ IG++++IF+M+ +GI+E R + + E+ ++ W +PQ L+G +E FT I ++EF+Y Q P+ MRS+ +L+ A NYLS FL+++V + T+ W+ ++LN G LDYF++L+A AKWY Sbjct: 412 QRIGIGLVISIFSMVSAGILEVARLNYVQTHNLYNEET----IPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSGGRPGWIAKNLNNGHLDYFFWLLAGLSFLNFLVYLWIAKWY 560
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23 Identity = 56/137 (40.88%), Postives = 85/137 (62.04%), Query Frame = -1 Query: 73 QRMAIGMILAIFTMIISGIIEDKRR-YLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVA 480 QRM IG++++IF MI +G++E R Y+ +Q +I W IPQ LIG +E FT I ++EF+Y Q P+ MRS+ +L+ A+ NYLS L+++V + TK W+P++LN+G LDYF+YL+A Sbjct: 412 QRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQIHMSI-----FWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLA 543
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.519e-21 Identity = 46/135 (34.07%), Postives = 82/135 (60.74%), Query Frame = -1 Query: 73 RMAIGMILAIFTMIISGIIEDKRRYLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVA 477 RM +G+ ++ M IS ++E RR A+S+ G A+ +S +WL+PQ L G +EA T I + EF+Y +FP++M SI SL +G A+++ L+ +++ V+ T W+ +++NKG +Y+Y+++A Sbjct: 417 RMGLGLFMSFLAMAISAMVESFRRKKAISQ--GYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYWVLA 549
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.281e-20 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 13 QRMAIGMILAIFTMIISGIIEDKRRYLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAAXXXXXXXXXXLCAKWYLGR 480 QRM IG+I I MI++ + E R +A GL + G L+ L+PQ L+G +++F +A++EF+Y Q PE+M+S+G S + AI N++S FL+S V TK G W+ +LN+ RLDY+Y A + K+Y+ R Sbjct: 412 QRMGIGLIFHILIMIVASVTERYRLKVAADH--GLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGRG-WILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVYR 564
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.979e-20 Identity = 51/136 (37.50%), Postives = 83/136 (61.03%), Query Frame = -1 Query: 73 QRMAIGMILAIFTMIISGIIEDKRRYLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVA 480 QRM IG+ +++ M + I+E R ++A +GL + GA +S LW IPQ ++G +E F I ++EF+Y Q P+ MRS+ +L + A+ NYLS ++++V FT W+ ++LN G LDYF++L+A Sbjct: 429 QRMGIGLFVSVLCMAAAAIVEIIRLHMA--NDLGLVES-GAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFWLLA 561
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19 Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = -1 Query: 73 QRMAIGMILAIFTMIISGIIEDKRRYLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVA 480 QRM IGMIL I MII+ I E R +A GL + LS L+PQ L+G ++AF IA++EF+Y Q PE+M+S+G S T A+ ++S L+S V + TK G W+ +LN+ RLD +Y A Sbjct: 412 QRMGIGMILHILIMIIASITERYRLKVAAEH--GLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRG-WIQNNLNESRLDNYYMFFA 544
BLAST of GE213230 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13 Identity = 43/157 (27.39%), Postives = 78/157 (49.68%), Query Frame = -1 Query: 10 QRMAIGMILAIFTMIISGIIEDKRRYLALSRPVGLEQRRGAISSLSGLWLIPQLSLIGFSEAFTIIAEVEFYYKQFPENMRSIGGSLTFVGFAISNYLSGFLISMVHRFTKGASTGDWLPEDLNKGRLDYFYYLVAAXXXXXXXXXXLCAKWYLGRD 480 QR+ +G+ M ++ ++E KR A + ++ L LIPQ ++G EA +++F+ ++ P+ M+ + L A+ + S L+++V +FT A W+ +DLNKGRL FY+LVA + +KWY+ ++ Sbjct: 421 QRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVKTL-----PLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHP--WIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKE 570 The following BLAST results are available for this feature:
BLAST of GE213230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213230 ID=GE213230; Name=GE213230; organism=Citrus sinensis; type=EST; length=504bpback to top |