GE213180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213180 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.906e-22 Identity = 64/151 (42.38%), Postives = 89/151 (58.94%), Query Frame = -3 Query: 155 LVYDITNDDYVNFLCANGYGPKLIQVITRIPARC-PAKRPRPENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSGA-AFGSIPWSDGKHEVRSPLVVT 601 L+YD+T +DY+ FLCA Y I+ ++R C P+K +LNYPS F+ GV + + RTVT+VG Y+VKV S GV ++V+P+ L F E +K S+ VT T DS SG+ +FGSI WSDGKH V SP+ ++ Sbjct: 614 LIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVADLNYPS----FAVNVDGVGAYKYTRTVTSVGGAGT-YSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSS----KPSGSNSFGSIEWSDGKHVVGSPVAIS 755
BLAST of GE213180 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.064e-16 Identity = 53/152 (34.87%), Postives = 78/152 (51.32%), Query Frame = -3 Query: 149 LVYDITNDDYVNFLCANGYGPKLIQVITRIPARCPA-KRPRPENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSGAAFGSIPWSDGKHEVRSPLVVTQL 601 LVYD DYV FLC GY + ++ IT + C + R +LNYPS S ++ F RT+T+V + Y + +P+ G+T++V P+ L F + SF +TV K V++ S+ WSDG H VRSP+ +T L Sbjct: 588 LVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFG--LSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQ-GLTISVNPNVLSFNGLGDRKSFTLTVRGSIKGFVVS------ASLVWSDGVHYVRSPITITSL 730
BLAST of GE213180 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15 Identity = 56/155 (36.13%), Postives = 81/155 (52.26%), Query Frame = -3 Query: 158 AAEVLVYDITNDDYVNFLCANGYGPK-LIQVITRIPARCPAKRPR--PENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSGAAFGSIPWSDGKHEVRSPLVV 613 A+ LVYD+ + YV FLC GY L ++ C + P ++LNYP+I L ++ + F R VTNVG P++VYT V +P KGV +TV+P L F++ +K SF V V A + G + W +H VRSP+V+ Sbjct: 595 ASPGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQ-LTLRSAKTSTLAVFRRRVTNVGPPSSVYTATVRAP-KGVEITVEPQSLSFSKASQKRSFKVVVKAKQ----MTPGKIVSGLLVWKSPRHSVRSPIVI 743 The following BLAST results are available for this feature:
BLAST of GE213180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213180 ID=GE213180; Name=GE213180; organism=Citrus sinensis; type=EST; length=624bpback to top |