GE213179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 7.335e-43 Identity = 81/105 (77.14%), Postives = 89/105 (84.76%), Query Frame = -2 Query: 7 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYLGRDH 321 YTEF GNF S+A QCLQKLP+SNNKFTYNCD HTFNYL DNG+TYCVV ES+GRQIPMAFLERVK++F +YGGGKA+TA AN LNKEFG KLKE MQY DH Sbjct: 21 YTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCA-DH 124
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 1.634e-42 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = -2 Query: 22 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 321 +T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+NG+TYCVVA +S+GRQIPMAFLERVK++F +YGGGKAATA AN LNKEFG KLKE MQY Sbjct: 21 FTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 4.755e-42 Identity = 78/100 (78.00%), Postives = 87/100 (87.00%), Query Frame = -2 Query: 22 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 321 YTEF GNF ++A QCLQKLP+SNNKFTYNCD HTFNYLV+NG+TYCVVA ES GRQIPMAFLERVK++F +YGGGKA TA AN LN+EFG KLKE MQY Sbjct: 86 YTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQY 185
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.383e-41 Identity = 77/100 (77.00%), Postives = 89/100 (89.00%), Query Frame = -2 Query: 22 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 321 +T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV++G+TYCVVA +S+GRQIPM+FLERVK++F +YGGGKAATA AN LNKEFG KLKE MQY Sbjct: 21 FTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.026e-36 Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = -2 Query: 22 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 321 +T+F GNF S+A Q L+ LP+SNNKFTYNCD HTFN LV+NG+TYCVVA +S+GR+IPMAFLERVK++F +YGG KAAT AN LNKEFG LKE MQY Sbjct: 21 FTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQY 120
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 1.481e-35 Identity = 73/107 (68.22%), Postives = 87/107 (81.31%), Query Frame = -2 Query: 4 YTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYLGRDHA 321 YTEF+GNF SIA QCLQKLP+S+N KFTYNCD HTFN+LV++GY YCVVA +S +QI +AFLERVK +F +YGGGKA+TA A LNKEFGP +KE M Y+ DHA Sbjct: 21 YTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYI-VDHA 126
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.777e-26 Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = -2 Query: 22 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG-------------------KAATAPANGLNKEFGPKLKELMQY 321 +T +SGNF++IA QCLQKLP +++K+TY+CD HTFN+LVDNG+ + VVADES+GR +P FLERVK++F +Y + A L++EFGP LKE MQY Sbjct: 21 HTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQY 139
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = -2 Query: 22 YTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 321 +T +GNF +I + L +P ++ K +Y + + F+YLV + TY +ADE GR+IP FL+ VK+ F S Y G K TA A G+N +F L+ LM + Sbjct: 18 FTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH 116
BLAST of GE213179 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.404e-11 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = -2 Query: 10 YTEFSGNFNSIAYQCLQKLPASNNK-FTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYLGRD 321 +T S N ++IA Q L+K+P N+ +Y+ D + F+ +G T +A+E++GR+IP AFLE + FV YG TA A +N+EF L + + Y D Sbjct: 18 FTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSND 121 The following BLAST results are available for this feature:
BLAST of GE213179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213179 ID=GE213179; Name=GE213179; organism=Citrus sinensis; type=EST; length=343bpback to top |