EY739435

Overview
NameEY739435
Unique NameEY739435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY739435 vs. ExPASy Swiss-Prot
Match: YGAF_ECOLI (Uncharacterized protein ygaF OS=Escherichia coli (strain K12) GN=ygaF PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 2.760e-17
Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 2 
Query:    8 CKRGAEATKQFCTEHGIKFEVCGKLLVASTPLEVQRMEALYARSQLNGMKVERLDADQLRQRETNIVGLGG 220
            C  G  ATK FC ++GI+++ CGK+LVA++ LE++RM AL+ R+  NG++ E L+AD+LR+RE NI GLGG
Sbjct:   66 CLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGG 136

HSP 2 Score: 25.7942 bits (55), Expect = 2.760e-17
Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 1 
Query:  220 GLFLHPTGIVDYREFCQTLARVMRRPVGE 306
            G+F+  +GIV YR+    +A++ +   GE
Sbjct:  136 GIFVPSSGIVSYRDVTAAMAKIFQSRGGE 164
The following BLAST results are available for this feature:
BLAST of EY739435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGAF_ECOLI2.760e-1753.52Uncharacterized protein ygaF OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-057-C12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739435 ID=EY739435; Name=EY739435; organism=Citrus sinensis; type=EST; length=436bp
CGACTTGTGCAAACGGGGCGCCGAAGCCACCAAGCAGTTCTGCACCGAGC
ACGGGATCAAGTTCGAGGTGTGCGGCAAGTTGCTGGTGGCCTCGACCCCG
CTGGAAGTGCAGCGAATGGAAGCCCTGTACGCCCGCTCGCAGCTCAACGG
CATGAAGGTCGAACGCCTGGACGCCGACCAGTTGCGCCAGCGCGAGACAA
ACATCGTCGGGCTGGGCGGGGGTTGTTTCTCCACCCCACCGGCATCGTCG
ATTACCGCGAATTCTGCCAAACCTTGGCCCGGGTCATGCGCCGGCCGGTG
GGTGAGAATTGGGTTGAACGCCCCTGTAACCTTCATGGTCGAGTGAACGT
GACGGTGTGCCCTCGGTCGTTCGGGTGGAAACGTGGGATGCGCTCCGCCT
GTGTGTGGGGTGGAGGGGGGGGAGCTGGCGCGCGGT
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