EY738534

Overview
NameEY738534
Unique NameEY738534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY738534 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.318e-87
Identity = 153/202 (75.74%), Postives = 169/202 (83.66%), Query Frame = 1
Query:   16 QLPDWSMXXXXXXXXXXXXEKQWMMLDWKPKRSDMLVDPFGIGKIIQDGFIFRQNFSIRSYEIGADGTASI*TLMNHLQETALNHVMTAGLLHAGFGATPSMAKKNLIWVVTRMQVVVHRYPTWNDVVNVETWVSASGKNGMRRDWLIRNANTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPVFLNSDPVVDEDTMK 621
            QLPDWSM            EKQWMMLDWKP+R DM++DPFGIGKI+QDG +F QNFSIRSYEIGAD TASI TLMNHLQETA+NH  +AGLL  GFGATP M KKNLIWVVTRMQVVV RYPTW DVV V+TWVSASGKNGMRRDWL+ N+ TGE LTRATS+WVMMNKLTRRLSK+P+EVR EIEP F+NSDPV+ ED+ K
Sbjct:   83 QLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMVIDPFGIGKIVQDGLVFSQNFSIRSYEIGADQTASIETLMNHLQETAINHCRSAGLLGEGFGATPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSETGEILTRATSVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQK 284          
BLAST of EY738534 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.711e-81
Identity = 144/206 (69.90%), Postives = 165/206 (80.10%), Query Frame = 1
Query:   16 QLPDWSMXXXXXXXXXXXXEKQWMMLDWKPKRSDMLVDPFGIGKIIQDGFIFRQNFSIRSYEIGADGTASI*TLMNHLQETALNHVMTAGLLHAGFGATPSMAKKNLIWVVTRMQVVVHRYPTWNDVVNVETWVSASGKNGMRRDWLIRNANTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPVFLNSDPVVDEDTMK*PTL 633
            QLPDWSM            EKQWMMLDWKPKR DMLVDPFG+G I+QDG +FRQNFSIRSYEIGAD TASI T+MNHLQETALNHV  AGL + GFG TP M K++LIWVV +MQV+V+RYPTW D V V TWV+ SGKNGMRRDWLI + NTGE LTRA+S+WVMMN+ TRRLSK+PDEVR EIEP F++S PV+++D  K P L
Sbjct:   87 QLPDWSMLLAAITTVFLAAEKQWMMLDWKPKRPDMLVDPFGLGSIVQDGLVFRQNFSIRSYEIGADRTASIETVMNHLQETALNHVKIAGLSNDGFGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGEILTRASSVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKL 292          
BLAST of EY738534 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.402e-53
Identity = 105/204 (51.47%), Postives = 133/204 (65.20%), Query Frame = 1
Query:   16 QLPDWSMXXXXXXXXXXXXEKQWMMLDWKPKRS--DMLVDPFGIGKIIQDGFIFRQNFSIRSYEIGADGTASI*TLMNHLQETALNHVMTAGLLHAGFGATPSMAKKNLIWVVTRMQVVVHRYPTWNDVVNVETWVSASGKNGMRRDWLIRNANTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPVFLNSDPVVDEDTMK 621
            +LPDWSM            EKQW  L+WKPK     +L D FG+      G +FR+ F+IRSYE+G D + SI  +MNH+QE  LNH  + G+L  GFG T  M+K++L+WVV R  V V RYPTW D V VE W+ ASG NGMRRD+L+R+  TGE LTR TSL V+MN  TRRLS +PDEVR EI P F+++  V D++  K
Sbjct:   59 RLPDWSMLFAVITTIFSAAEKQWTNLEWKPKPKLPQLLDDHFGL-----HGLVFRRTFAIRSYEVGPDRSTSILAVMNHMQEATLNHAKSVGILGDGFGTTLEMSKRDLMWVVRRTHVAVERYPTWGDTVEVECWIGASGNNGMRRDFLVRDCKTGEILTRCTSLSVLMNTRTRRLSTIPDEVRGEIGPAFIDNVAVKDDEIKK 257          
BLAST of EY738534 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.402e-53
Identity = 108/204 (52.94%), Postives = 132/204 (64.71%), Query Frame = 1
Query:   16 QLPDWSMXXXXXXXXXXXXEKQWMMLDWKPKRS--DMLVDPFGIGKIIQDGFIFRQNFSIRSYEIGADGTASI*TLMNHLQETALNHVMTAGLLHAGFGATPSMAKKNLIWVVTRMQVVVHRYPTWNDVVNVETWVSASGKNGMRRDWLIRNANTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPVFLNSDPVVDEDTMK 621
            +LPDWSM            EKQW  L+WKPK +   +L D FG       G +FR+ F+IRSYE+G D + SI  +MNHLQE ALNH  + G+L  GFG T  M+K++LIWVV R  V V RYP W D V VE WV ASG NG R D+L+R+  TGE LTR TSL VMMN  TRRLSK+P+EVR EI P F+++  V DE+  K
Sbjct:   59 KLPDWSMLFAVITTIFSAAEKQWTNLEWKPKPNPPQLLDDHFG-----PHGLVFRRTFAIRSYEVGPDRSTSIVAVMNHLQEAALNHAKSVGILGDGFGTTLEMSKRDLIWVVKRTHVAVERYPAWGDTVEVECWVGASGNNGRRHDFLVRDCKTGEILTRCTSLSVMMNTRTRRLSKIPEEVRGEIGPAFIDNVAVKDEEIKK 257          
BLAST of EY738534 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38
Identity = 71/154 (46.10%), Postives = 101/154 (65.58%), Query Frame = 1
Query:  106 KRSDMLVDPFGIGKIIQDGFIFRQNFSIRSYEIGADGTASI*TLMNHLQETALNHVMTAGLLHAGFGATPSMAKKNLIWVVTRMQVVVHRYPTWNDVVNVETWVSASGKNGMRRDWLIRNANTGETLTRATSLWVMMNKLTRRLSKMPDEVRQE 567
            KRS  L +   +G + +DG  +++ F +R YE+G + TA++ T+ N LQE   NH  + G    GF  TP+M K +LIWV  RM + ++RYP W+DVV +ETW  + G+ G RRDW+I++  T E + RATS WVMMN+ TRRL K+ D+VR E
Sbjct:   61 KRSSSLAEKLRLGSLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGGNHAQSVGFSTDGFATTPTMRKLHLIWVTARMHIEIYRYPAWSDVVEIETWCQSEGRIGTRRDWIIKDFATDEVIGRATSKWVMMNQDTRRLQKVSDDVRDE 214          
The following BLAST results are available for this feature:
BLAST of EY738534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FATB_GOSHI4.318e-8775.74Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_CUPHO2.711e-8169.90Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_UMBCA1.402e-5351.47Lauroyl-acyl carrier protein thioesterase, chlorop... [more]
FATB_CINCA1.402e-5352.94Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATA_CORSA4.841e-3846.10Oleoyl-acyl carrier protein thioesterase, chloropl... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-044-E12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY738534 ID=EY738534; Name=EY738534; organism=Citrus sinensis; type=EST; length=828bp
TCACCCACGCGTCCGCAGTTACCTGACTGGAGTATGCTTCTTGCTGCTAT
AACAACAATCTTCTTGGCAGCAGAGAAGCAGTGGATGATGCTTGATTGGA
AACCAAAGCGATCTGACATGCTTGTGGACCCATTTGGGATTGGGAAAATA
ATTCAGGATGGTTTCATTTTCCGGCAAAATTTCTCAATTAGATCATATGA
GATAGGTGCTGATGGTACTGCATCTATATAGACATTAATGAATCATTTAC
AGGAAACAGCGCTTAATCATGTTATGACTGCTGGTCTTCTACATGCTGGC
TTTGGTGCAACCCCATCGATGGCTAAAAAGAACCTGATATGGGTGGTTAC
TCGGATGCAGGTTGTTGTACACCGCTATCCCACTTGGAATGATGTTGTAA
ATGTAGAAACTTGGGTTAGTGCATCTGGAAAAAATGGTATGCGGCGTGAT
TGGCTCATTCGCAATGCTAACACAGGTGAAACATTAACAAGAGCAACCAG
TCTGTGGGTAATGATGAATAAACTGACTAGGAGGTTGTCCAAAATGCCCG
ATGAAGTTCGTCAGGAAATTGAACCGGTATTTCTGAATTCTGACCCTGTT
GTCGATGAGGATACCATGAAGTGACCGACCTTGCCGACCATACTGCCGAT
CATGTGCGTAGAGGTCTACGCCTACGTGGAGTGAGTCTGATCTCCCCCGC
CTGGCTGTATGGTAAGTAAGTGGCCGGATCGCCAAAGCTGCTCCCCCCCG
ACCTCGCGAGATCCGGACCCCCTCCGGCCGCCGCGAGTGTAGGGGTGGTG
GGGAGAGGAGGGGGGGGTCAGAGGGGGA
back to top