EY738442

Overview
NameEY738442
Unique NameEY738442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.194e-81
Identity = 147/155 (94.84%), Postives = 153/155 (98.71%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHESLLEALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAKGA+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF+EILTKIDRRSGKE+EKEPKFLKNGDAG VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP+G
Sbjct:  282 MHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.841e-80
Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHE+L EALPGDNVGFNVKNV+VKDLKRG+VASNSKDDPAKGA++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKE+EKEPKFLKNGDAG VKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+VDKKDP+G
Sbjct:  282 MHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.017e-80
Identity = 143/155 (92.26%), Postives = 153/155 (98.71%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHE+L EALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAKGA++FT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETF+EYPPLGRFAVRDMRQTVAVGV+K+VDKKDP+G
Sbjct:  282 MHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.552e-80
Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGA++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE+LTKIDRRSGKELEKEPKFLKNGDAG VKM+PTKPMVVETF+EYPPLGRFAVR MRQTVAVGVIK+V+KKDP+G
Sbjct:  282 MHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELLTKIDRRSGKELEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRVMRQTVAVGVIKAVEKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 8.557e-80
Identity = 146/155 (94.19%), Postives = 151/155 (97.42%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHE+L EALPGDNVGFNVKNV+VKDLKRG VASNSKDDPAK A+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSV+KKDPSG
Sbjct:  282 MHHEALQEALPGDNVGFNVKNVAVKDLKRGIVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 4.247e-79
Identity = 142/155 (91.61%), Postives = 152/155 (98.06%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHESL EA PGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A+NFT+QVII+NHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKDP+G
Sbjct:  282 MHHESLTEAHPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIINHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.547e-79
Identity = 141/155 (90.97%), Postives = 152/155 (98.06%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHE+L EALPGDNVGFNVKNV+VKDLKRG+VASNSKDDPAK A+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKE+EKEPKFLKNGDAG VKMIPTKPMVVETF+EYPPLGRFAVRDMRQTVAVGVIKSV+KKDP+G
Sbjct:  282 MHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 7.244e-79
Identity = 142/155 (91.61%), Postives = 152/155 (98.06%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHE+L EALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKDP+G
Sbjct:  282 MHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.244e-79
Identity = 143/155 (92.26%), Postives = 150/155 (96.77%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            +HHE+L EALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A+NFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETF  YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+G
Sbjct:  282 MHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436
[Close]
BLAST of EY738442 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.595e-78
Identity = 142/155 (91.61%), Postives = 150/155 (96.77%), Query Frame = 1 
Query:   10 VHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 474
            VHHESLLEALPGDNVGFNVKNV+VKDLKRGYVASNSKDDPAK A+NFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELE  PKFLKNGDAGFVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIKSV+KK+P+G
Sbjct:  282 VHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEPTG 436
The following BLAST results are available for this feature:
BLAST of EY738442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_ARATH1.194e-8194.84Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A_TOBAC3.841e-8092.90Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_SOLLC5.017e-8092.26Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A1_DAUCA6.552e-8092.90Elongation factor 1-alpha OS=Daucus carota PE=3 SV... [more]
EF1A_MANES8.557e-8094.19Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A_SOYBN4.247e-7991.61Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_VICFA5.547e-7990.97Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_ORYSJ7.244e-7991.61Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A2_DAUCA7.244e-7992.26Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]
EF1A1_HORVU3.595e-7891.61Elongation factor 1-alpha OS=Hordeum vulgare PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-043-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY738442 ID=EY738442; Name=EY738442; organism=Citrus sinensis; type=EST; length=821bp
CACGCGTCCGTGCACCATGAGTCTCTCCTGGAGGCACTTCCTGGTGATAA
TGTGGGGTTCAACGTTAAGAATGTTTCAGTGAAGGATCTTAAGCGTGGTT
ACGTTGCATCTAACTCCAAGGATGATCCCGCCAAGGGGGCATCCAACTTC
ACCTCCCAAGTTATCATCATGAACCACCCTGGCCAGATTGGAAACGGTTA
TGCACCTGTTCTTGATTGCCACACTTCCCACATTGCTGTCAAGTTTGCTG
AAATCTTGACCAAGATTGACAGGCGATCTGGTAAGGAGCTGGAGAAGGAG
CCCAAATTCTTAAAGAATGGTGATGCTGGGTTTGTTAAGATGATTCCCAC
CAAGCCTATGGTTGTGGAAACTTTCTCCGAATATCCCCCACTTGGTCGTT
TTGCTGTGAGAGACATGCGCCAGACTGTCGCTGTTGGAGTCATCAAGAGC
GTGGACAAGAAGGATCCATCTGGAGCCAAGGTAACCAAGTCTGCTGCCAA
GAAGAAGTGAACCGTGCTGGTATCTTTGTCTGCAAGTAATGTCTATAGGT
GTCATCACAATAAAGATTGTGTTCTTTTTAAGCATAAATGTGTTGGGTGT
TTGGGTCCTCCATTTGCTGGTTATAATGACGATGCGCCACCATCGACAAG
AGACTTTTGTGCACCGAACTGGGTGCTTGATCGGCGGTGGCGACATTACT
GTATTGAGTCTTGCTGACTGGTGGCCACGTCCAGGTAACACTTGGATATG
TTGTGAGCACCCCACGACCCTTACGTCCCGGCTCACCTCCCTAAAATCTC
GGCGCGGGAAGTCCCAAGCTC
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