EY736475

Overview
NameEY736475
Unique NameEY736475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_SYMTH (GTPase obg OS=Symbiobacterium thermophilum GN=obg PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.913e-66
Identity = 132/273 (48.35%), Postives = 176/273 (64.47%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQ---PEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLEKNKEPEKDFEHQINWNPLADLVDRP 820
            +D+V+KV PGTV+++    +VL +L+ PGQ+A++         N  F + TNK P   E GE G E WL LELK+VADVG+VG PNAGKST LS +SAA+P IANYPFTTL P LGVV      + V+AD+PGL+EGAH+G GLGHEFLRH ER   L+H++DG+  +   P  +FD +  EL  ++PE+A +P +VAFNKMDLP+A E  P  +E L+ RG   F +S   REG   +  AA+ L+ +   PE          P A++V RP
Sbjct:   83 EDLVIKVPPGTVVKDDDTGEVLFDLVEPGQRAVVARGGRGGRGNMRFATPTNKCPTFYEKGEPGEERWLLLELKVVADVGLVGFPNAGKSTFLSAVSAARPKIANYPFTTLTPVLGVVDLGEGRSFVIADIPGLIEGAHQGVGLGHEFLRHVERTKVLIHVLDGAGTEGRDPLSDFDVIHNELRAYNPELAARPTLVAFNKMDLPDARENLPRVREALEKRGYRVFPISGATREGFRPLLEAAYDLIRQWVPPEPA-------APEAEMVYRP 348          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_HELMI (GTPase obg OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=obg PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.494e-60
Identity = 123/249 (49.40%), Postives = 165/249 (66.27%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQ---PEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLEK 748
            QD+ V+V  GTV+++A   K+L+++   GQ+ +          NA F S TN+VP IAE GE G E WLELELKL+ADVG+VG PN GKSTL++ +SAA+P IANY FTTL PNLGVV      + V+AD+PGL+EGAH G GLGH+FLRHTER   L+H++D S  +   P  ++DA+  EL ++ PE+A+KP ++A NKMDLP A E     +EKL   G   F +SA  R+G   +    H+ LE+
Sbjct:   83 QDMTVRVPIGTVVKDAETGKILVDITCDGQQYIAARGGRGGRGNAKFVSSTNRVPLIAEKGEPGEEHWLELELKLLADVGLVGFPNVGKSTLIASVSAARPKIANYHFTTLEPNLGVVRIAEGQSFVMADIPGLIEGAHTGAGLGHDFLRHTERTRYLIHVLDISGSEGRDPLEDYDAINRELALYKPELADKPMVIAANKMDLPGAEENLARLREKL-GEGAVIFPISAATRQGLEPLIYHVHKGLEE 330          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_THETN (GTPase obg OS=Thermoanaerobacter tengcongensis GN=obg PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.960e-60
Identity = 119/235 (50.64%), Postives = 160/235 (68.09%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQ---PEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREG 706
            +D+ +KV  GT I      +V+ +L+ P QKA++L        NA F + T K PR AE+GE+G EMW+ LELKL+ADVG+VG PNAGKSTLL+  S A+P IANYPFTTL PNLGVV      + V+AD+PGL+EGAHRG GLGH+FLRH ER   L+H++D S  +   P  +F+ +  EL ++   +   P IVA NKMDLPE  EK+P F+E+++ RG E + +SA+ +EG
Sbjct:   84 EDLYIKVPVGTTIINDETGEVIADLIKPYQKAIVLKGGKGGRGNAKFATPTLKTPRFAESGEKGREMWVRLELKLLADVGLVGFPNAGKSTLLASCSRARPKIANYPFTTLTPNLGVVEHK-GKSFVMADIPGLIEGAHRGEGLGHDFLRHIERTKMLIHVVDVSGSEGRDPVEDFEKINEELRLYDERLVTLPQIVAANKMDLPEGKEKYPRFEEEIKKRGYEVYPISALTKEG 317          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_CALS8 (GTPase obg OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=obg PE=3 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.734e-59
Identity = 116/254 (45.67%), Postives = 168/254 (66.14%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGS---AEQPEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLEKNKEPE 763
            +D+++KV  GTVI++A   +++ +L   G +A++         NA F + T +VPR AE GE+G E+W+ LELK++ADVG++G PN GKST LSV + A+P IANYPFTT  PNLG+V      + V+AD+PGL+EGA  G GLGH+FLRH ER   L+H++D S     +P  +F  +  EL+ +SPE+A+KP IVA NKMDLP+A   +  FKE+++  G E + +SA    G  +V   A++LL++ K  E
Sbjct:   83 EDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGRGGRGNAHFATATRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNARPEIANYPFTTKYPNLGIVYISEGESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVLIHIVDVSGSEGREPVEDFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEEIEKMGYEVYPISAATGMGIREVLKRAYELLKQQKAAE 336          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_PERMH (GTPase obg OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=obg PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.265e-59
Identity = 116/254 (45.67%), Postives = 167/254 (65.75%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQ---PEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLEKNKEPE 763
            +D+++KV  GTV+++A   ++L +L+  GQK ++         NA+FK+ TN+ P  AE G+ G E W+ELELKL+AD+GI+G PNAGKSTL+SV+S A+P IA+YPFTTL P LGV+  DY  ++V+AD+PGL+EGA +G GLGHEFLRH ER  AL+H+ID S ++   P   F+ +  ELE +SPE+ +KP IV  NK+D+          K++   RG     +S V +EG  ++     ++ EK  E E
Sbjct:   84 KDLIIKVPVGTVVKDAETGEILADLIYDGQKVVVAKGGRGGRGNAAFKTSTNQAPDYAEEGQPGEERWIELELKLIADIGIIGFPNAGKSTLISVLSKAKPKIADYPFTTLTPVLGVLQLDYGKSVVIADIPGLIEGASKGAGLGHEFLRHIERTKALIHMIDISDQRERDPIEAFEIINKELEKYSPELVKKPQIVVGNKIDMLSDRSLIEKLKKEFSKRGYPFVAVSLVTKEGLDQLIKLIAEVYEKISEKE 337          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_ANATD (GTPase obg OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=obg PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.958e-59
Identity = 115/254 (45.28%), Postives = 168/254 (66.14%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGS---AEQPEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLEKNKEPE 763
            +D+++KV  GTVI++A   +++ +L   G +A++         N+ F + T +VPR AE GE+G E+W+ LELK++ADVG++G PN GKST LSV + A+P IANYPFTT  PNLG+V      + V+AD+PGL+EGA  G GLGH+FLRH ER   L+H++D S     +P  +F  +  EL+ +SPE+A+KP IVA NKMDLP+A   +  FKE+++  G E + +SA    G  +V   A++LL++ K  E
Sbjct:   83 EDLIIKVPVGTVIKDAETGEIIADLSREGDRAIVAHGGRGGRGNSHFATSTRQVPRFAEVGEKGDELWVILELKVLADVGLIGYPNVGKSTFLSVATNARPEIANYPFTTKYPNLGIVYISEGESFVLADIPGLIEGASEGAGLGHQFLRHVERTKVLIHIVDVSGSEGREPVEDFIKINEELKKYSPELAQKPQIVAANKMDLPDAQAYFELFKEEIEKMGYEVYPVSAATGMGVREVLKRAYELLKQQKAAE 336          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_DESRM (GTPase obg OS=Desulfotomaculum reducens (strain MI-1) GN=obg PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.468e-58
Identity = 123/277 (44.40%), Postives = 179/277 (64.62%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQ---PEFEFDAVRLELEMFSPEIAEKPYIVAFNKMD-LPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLE-----KNKEPEKD--FEHQINWNPLADL 808
            +D++VKV  GTV+REA   +++ +LL  GQ+ ++         N  F S +NK PRIAE GE G E+WLELELK++ADVG++G PNAGKST +S++SAA+P IA+YPFTTL+PNLGVVS   + + V+AD+PGL+EGA +G GLGHEFLRHTER   L+H++D +  +   P  +   +  ELE++ P ++ +P I+A NKMD +P A E     +E+      E + +SA   +G  KV     +LL      + ++PE+D  FE +  +N   D+
Sbjct:   83 EDLLVKVPTGTVVREAETGRLIADLLENGQQVVIAKGGRGGRGNVHFASSSNKAPRIAEKGEPGEELWLELELKVIADVGLIGFPNAGKSTFISMVSAAKPKIADYPFTTLVPNLGVVSAGEEGSFVLADIPGLVEGASQGVGLGHEFLRHTERTRLLIHVVDTAGTEGRDPVEDIKIINRELELYDPRLSTRPQIIAANKMDIIPLAEENLARLREEF-GEQFEIYPISAATNQGLDKVIHRVAELLAQLPKIEPEQPEEDVMFEPEERFNIKRDI 358          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_CLOTH (GTPase obg OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=obg PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.272e-58
Identity = 108/249 (43.37%), Postives = 169/249 (67.87%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQ---PEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLEK 748
            +D+++KV PGT++++    ++L +L+ PG+K ++         N  F + T +VP  A+ GE G E+W+ LELKL+ADVG++G PN GKST+LS+++AAQP IANY FTT+ PNLGVV+ D ++  V+AD+PGL+EGAH+G GLGHEFL+H ER   L+H++D S  +   P  +F+ +  EL+ ++P + E+P I+A NKMD+  A E    F++ ++ RG + F +SA   +G  ++   A Q L++
Sbjct:   83 EDLIIKVPPGTLVKDEQTGRILADLVKPGKKVVIAKGGKGGAGNQHFATPTRQVPSFAKPGEPGEELWVILELKLLADVGLIGFPNVGKSTILSMVTAAQPKIANYHFTTINPNLGVVNIDAENAFVMADIPGLIEGAHQGVGLGHEFLKHIERTKLLIHVVDISGSEGRDPVQDFEVINEELKKYNPVLCERPQIIAANKMDVTGAEENLEKFRKVIEPRGYKIFPVSAASNKGLKELIYYAAQKLKE 331          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_MYXXD (GTPase obg OS=Myxococcus xanthus (strain DK 1622) GN=obg PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.769e-57
Identity = 109/248 (43.95%), Postives = 162/248 (65.32%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLID----GSAEQPEFEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLL 742
            +D+V+KV  GT++++A   ++L++L   GQ+ +          N +F + T + PR A++G +G E+ L LELKL+ADVG++G PNAGKST +S +S A+P +A+YPFTTL+PNLG+V +    + V+AD+PG++EGA  G GLGH+FLRH ERC  L+HLID    G    P  +FD +  EL  +SPE+A KP +VA NK+DLP+A  +   F E L+ RGI  + +S    EG   +  +  ++L
Sbjct:   84 EDMVLKVPVGTLVKDANTGELLVDLSEAGQRWVAAKGGRGGLGNMNFATSTRQTPRFAQDGTKGEELTLRLELKLLADVGLLGFPNAGKSTFISRVSRARPKVADYPFTTLVPNLGMVQYKDGLSFVMADIPGIIEGASEGVGLGHQFLRHVERCKVLIHLIDMGAEGEGRAPLHDFDVLNAELGKYSPELASKPQVVAANKLDLPDAQARLEGFTEALRERGIRVYPVSCATGEGMQPLMDSVAEVL 331          
BLAST of EY736475 vs. ExPASy Swiss-Prot
Match: OBG_CLOCE (GTPase obg OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=obg PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.168e-57
Identity = 110/248 (44.35%), Postives = 166/248 (66.94%), Query Frame = 2
Query:   11 QDVVVKVAPGTVIREAGKSKVLLELLVPGQKALLLPXXXXXXXNASFKSGTNKVPRIAENGEEGPEMWLELELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHLIDGSAEQPE---FEFDAVRLELEMFSPEIAEKPYIVAFNKMDLPEAYEKWPSFKEKLQARGIEPFCMSAVKREGPMKVSPAAHQLLE 745
            +D+++KV  GTV+++     VL++L+ PGQ  ++         N  F + T +VP  A++G+ G E  L LE+K++ADVG+VG PN GKST+LS++SAA+P IANY FTTL+PNLGVV  ++  + V+AD+PGL+EGAH G GLGH+FLRH ER   LVH++D S  +      +FD +  EL+ ++  ++ +P IVA NKMD+P A E + +FKE+L+ RG + F +SA   +G  ++  A  + L+
Sbjct:   83 EDLIIKVPLGTVVKDELTDMVLVDLIKPGQTCVIAKGGRGGKGNQHFATPTRQVPNFAKSGDLGEEYSLILEMKMIADVGLVGYPNVGKSTILSMVSAAKPKIANYHFTTLVPNLGVVQIEHGKSFVIADIPGLIEGAHEGVGLGHQFLRHVERTKLLVHVVDVSGVEGRDAVEDFDTINSELQKYNQVLSTRPQIVAANKMDIPGAEENYKAFKEELEKRGYKVFGISAATNKGLKELLYAVSETLK 330          
The following BLAST results are available for this feature:
BLAST of EY736475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OBG_SYMTH1.913e-6648.35GTPase obg OS=Symbiobacterium thermophilum GN=obg ... [more]
OBG_HELMI3.494e-6049.40GTPase obg OS=Heliobacterium modesticaldum (strain... [more]
OBG_THETN5.960e-6050.64GTPase obg OS=Thermoanaerobacter tengcongensis GN=... [more]
OBG_CALS81.734e-5945.67GTPase obg OS=Caldicellulosiruptor saccharolyticus... [more]
OBG_PERMH2.265e-5945.67GTPase obg OS=Persephonella marina (strain DSM 143... [more]
OBG_ANATD2.958e-5945.28GTPase obg OS=Anaerocellum thermophilum (strain DS... [more]
OBG_DESRM1.468e-5844.40GTPase obg OS=Desulfotomaculum reducens (strain MI... [more]
OBG_CLOTH4.272e-5843.37GTPase obg OS=Clostridium thermocellum (strain ATC... [more]
OBG_MYXXD2.769e-5743.95GTPase obg OS=Myxococcus xanthus (strain DK 1622) ... [more]
OBG_CLOCE6.168e-5744.35GTPase obg OS=Clostridium cellulolyticum (strain A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-G06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736475 ID=EY736475; Name=EY736475; organism=Citrus sinensis; type=EST; length=843bp
CACGCGTCCGCAGGATGTAGTGGTTAAGGTGGCGCCAGGGACAGTTATTA
GAGAGGCTGGAAAATCGAAGGTTTTGTTGGAGTTATTGGTTCCAGGGCAG
AAGGCATTGTTGCTGCCGGGTGGCAGAGGTGGTAGAGGAAACGCATCGTT
TAAAAGTGGAACGAATAAGGTCCCGAGAATTGCTGAGAATGGTGAAGAAG
GTCCTGAAATGTGGTTGGAGTTGGAGTTGAAGCTAGTAGCGGATGTTGGA
ATAGTGGGTGCTCCGAATGCTGGAAAAAGTACACTTTTGAGTGTGATAAG
TGCTGCCCAGCCAACAATAGCAAATTACCCTTTTACCACTTTGCTTCCCA
ATCTTGGTGTAGTTTCATTCGATTATGATTCTACCATGGTAGTAGCAGAT
CTGCCAGGTTTACTTGAAGGAGCTCACCGGGGTTTTGGTTTGGGTCACGA
ATTTTTACGGCACACTGAGAGGTGTTCTGCCCTGGTTCATCTTATTGATG
GCTCAGCGGAGCAGCCAGAGTTTGAGTTTGATGCAGTTCGTCTGGAGCTG
GAAATGTTCAGTCCCGAAATTGCAGAGAAGCCTTACATAGTTGCTTTTAA
CAAAATGGACCTTCCAGAAGCATATGAGAAGTGGCCATCCTTTAAGGAAA
AGTTACAAGCCCGTGGCATTGAACCTTTTTGCATGAGTGCAGTGAAAAGG
GAGGGCCCCATGAAGGTATCTCCTGCTGCTCATCAACTACTGGAGAAAAA
TAAAGAACCTGAGAAAGACTTTGAACATCAGATTAATTGGAACCCACTAG
CTGATCTGGTTGATAGACCCCCGAGCGCCTCCACTCAGGGACT
back to top