EY736461

Overview
NameEY736461
Unique NameEY736461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 6.791e-59
Identity = 113/167 (67.66%), Postives = 133/167 (79.64%), Query Frame = 2
Query:   17 HTHLYPPRY----QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKILKRLRET 505
            HT   PP +    +ASNILLDS   AKVADFGLSRLAPV D EG  P HVST+VKGTPGYLDPEYFLTH+LTDKSDVYSLGVVLLEL TGMQPI+HGKNIVRE+N+A +SG + S +D RM S P EC+E+F TLALRCC ++ +  PSM++VVRELE I + + E+
Sbjct:  738 HTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIAYESGSILSTVDKRMSSVPDECLEKFATLALRCCREETDARPSMAEVVRELEIIWELMPES 904          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.990e-51
Identity = 100/160 (62.50%), Postives = 122/160 (76.25%), Query Frame = 2
Query:   17 HTHLYPP----RYQASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKI 484
            HT   PP      + SNILLDS +N KVADFG+S+L   LD  G    HV+TIVKGTPGY+DPEY+L+H+LT+KSDVYSLG+V LE+LTGM+PISHG+NIVREVN A D+GM+ S+ID  MG Y  ECV+RF+ LA+RCC D PE  P M ++VRELE I
Sbjct:  744 HTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLI-ALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGRNIVREVNEACDAGMMMSVIDRSMGQYSEECVKRFMELAIRCCQDNPEARPWMLEIVRELENI 902          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.131e-28
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM----VFSIIDNRM--GSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKILK 490
            +++NILLD +L AKVADFGLS+L  V D E     HV+T VKGT GYLDPEY++T++LT+KSDVY  GVV+LELLTG  PI  G  +V+EV    D       +  ++D  +   S   +  E++V +AL+C   +  + P+MS+VV+ELE IL+
Sbjct:  760 KSNNILLDEHLTAKVADFGLSKL--VGDPE---KAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILR 909          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.578e-26
Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTG---MQPISHGKNIVREVNVARDSGMVFSIID-NRMGSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKILK 490
            ++ NILLD +  AK+ADFGLSR   V ++     +HVST V GTPGYLDPEY+ T++LT+KSDVYS G+VLLE++T    ++  +  ++I   V        + +I+D N +G Y S  V + + LA+ C    P   P MS VV+EL++ +K
Sbjct:  700 KSMNILLDEHFQAKLADFGLSRSFSVGEE-----SHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELKQCIK 847          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.898e-26
Identity = 70/152 (46.05%), Postives = 97/152 (63.82%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK---NIVREVNVARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKIL 487
            + +NILL+ +L+AK+ADFGLSR  P+   EG   THVST+V GTPGYLDPEY+ T+ L +KSDVYS G+VLLE++T    I+  +   +I   V +    G + +I+D ++ G Y S  V R V LA+ C +      P+MS VV EL + L
Sbjct:  719 KTTNILLNEHLHAKLADFGLSRSFPI---EGE--THVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSREKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIELNECL 865          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.293e-25
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK---NIVREVNVARDSGMVFSIID-NRMGSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKIL--KRLRE 502
            + +NILLD  L AK+ADFGLSR  P+  +     TH+ST+V GTPGYLDPEY+ T +L +KSDVYS G+VLLE++T    I   +   +I + V      G +  I+D N  G Y S  V R + LA+ C +    + P+MS V  EL++ L  + LRE
Sbjct:  706 KTTNILLDEQLKAKLADFGLSRSFPIGGE-----THISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELKECLVSENLRE 859          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.415e-25
Identity = 64/154 (41.56%), Postives = 94/154 (61.04%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPI-----SHGKNIVREVNVARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKIL 487
            + +NILL+ NL AK+ADFGLS++ P  D      +HV T V GTPGY+DPEY+ T KL +KSDVYS G+VLLEL+TG + I         N+V  V      G +  ++D R+ G + S    +FV +A+ C  D+  + P+ + +V +L++ L
Sbjct:  706 KTANILLNDNLEAKIADFGLSKVFPEDD-----LSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCL 854          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 68/165 (41.21%), Postives = 95/165 (57.58%), Query Frame = 2
Query:   17 HTHLYPPRY----QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTG---MQPISHGKNIVREVNVARDSGMVFSIIDNRMG-SYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKIL 487
            HT   PP      + +NILLD +  AK+ADFGLSR  PV  +     THVST V GTPGYLDPEY+ T++L +KSDVYS G+VLLE++T    +Q      +I   V      G + +++D R+   Y    V + + +A+ C +   E  P+MS V  EL++ L
Sbjct:  687 HTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGE-----THVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQCL 846          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK---NIVREVNVARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKIL----KRLRETD 508
            ++SNILLD  L AK+ADFGLSR  P+ D+     +HVST+V GT GYLD EY+ T++L++KSDVYS GVVLLE++T    I H +   +I   V +    G + +I+D ++ G Y S    + + LA+ C +      P+MS VV EL++ L     R R+ D
Sbjct:  694 KSSNILLDDQLQAKLADFGLSRSFPIGDE-----SHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKECLVSENNRTRDID 851          
BLAST of EY736461 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24
Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = 2
Query:   44 QASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK---NIVREVNVARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHLPSMSDVVRELEKIL 487
            + +NILLD +  AK+ADFGLSR  PV  +     +HVST++ GTPGYLDPEY+ T +L++KSDVYS G+VLLE++T    I   +   +I + V    + G +  I+D ++ G Y S    R + LA+ C        P+MS VV EL++ L
Sbjct:  707 KTTNILLDEHYKAKLADFGLSRSFPVGGE-----SHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHITQWVGSELNGGDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVIELKECL 853          
The following BLAST results are available for this feature:
BLAST of EY736461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
Y1684_ARATH6.791e-5967.66Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH3.990e-5162.50Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH2.131e-2847.74Probable leucine-rich repeat receptor-like protein... [more]
Y5169_ARATH7.578e-2643.14Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH9.898e-2646.05Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PAM74_ARATH1.293e-2544.03Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH6.415e-2541.56Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH1.429e-2441.21Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH1.429e-2442.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5596_ARATH2.438e-2442.76Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-F02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736461 ID=EY736461; Name=EY736461; organism=Citrus sinensis; type=EST; length=856bp
CACGCGTCCGCCGAAGCACACCCACCTGTATCCACCGAGATATCAAGCCA
GCAATATACTTCTGGATTCCAATTTGAATGCCAAAGTTGCTGATTTCGGC
CTCTCGCGGCTTGCTCCAGTCCTGGATGATGAAGGAACAATGCCAACTCA
TGTTTCCACAATTGTGAAGGGTACACCGGGTTACCTCGATCCAGAATACT
TTTTGACTCATAAGTTGACAGATAAAAGTGATGTTTATAGCCTTGGAGTT
GTACTCCTGGAACTATTGACGGGTATGCAACCAATATCACATGGCAAAAA
TATTGTCCGCGAGGTCAATGTGGCCCGTGATTCAGGTATGGTGTTCTCGA
TCATAGACAATAGAATGGGCTCTTATCCATCAGAATGTGTAGAGAGATTT
GTAACTTTGGCACTCAGATGTTGCCATGACAAGCCAGAACATCTGCCATC
CATGTCAGATGTTGTCAGAGAGCTCGAAAAGATTCTCAAAAGGTTGCGCG
AAACTGATTCCCTGGTTGCTGAATCGGAACTCAGTTCCCTCCTGTGTGGG
CAGTCAAGTAAAGTAGTTCGTCGGTTCGTGTACAGGGATCCTTATGTCTC
CCCTCCACTGTCTCGCGCCGTGCGCTCGGTGGGGGGGGGTGGGGCGTGGG
GGGGGTCGGGGGAGGTGTGGGGTCCGCGCGGTTGGGGGGAGCGCGTGCCG
GCAGGGAAGCCGGCGGAGAGGGGGGTTGGAGGGTGGGTGGGGGGATGGGG
GGGGGAGGGGGGGGGGTGGGGGGGGGGGCGGGGGGGGTGGGGGGGGCGCG
CGCCGCGGCGGGGGGGGGGCGGGGGGGGGGCGGGGGCGGGGGGGCGGGGG
GTGGCC
back to top