EY736436

Overview
NameEY736436
Unique NameEY736436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 1.689e-84
Identity = 156/199 (78.39%), Postives = 173/199 (86.93%), Query Frame = 2
Query:   95 MASHSALAPSRIPAITRIPSKTT-HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            MA+H+ALA SRIP   R+ SK+  HSFP QCS+KRL+VAEF+GLR ++         +ASFFDAV AQ+ PK    S PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VVV+NDSGGVKNASHLLKYDS+LGTFKA+VKIVDNETISVDGKLIKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ
Sbjct:    1 MATHAALAVSRIPVTQRLQSKSAIHSFPAQCSSKRLEVAEFSGLRMSSIGG------EASFFDAVAAQIIPKAVTTSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 193          

HSP 2 Score: 28.1054 bits (61), Expect = 1.689e-84
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  699 KVIITAPAKGADFQPMSLDLRER 767
            KVIITAPAKGAD     + + E+
Sbjct:  198 KVIITAPAKGADIPTYVMGVNEQ 220          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.724e-84
Identity = 157/221 (71.04%), Postives = 185/221 (83.71%), Query Frame = 2
Query:   95 MASHSALAPSRIPAITRIPSKTTHSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQL-VPXSYYHCSSQRCRLSTYVVG 754
            MA+H+ALA +RIP  TR PSKT+HSFP+QC++KRL+V EF+GL++ +  +Y   ARD+SF+D V AQLT K A GS  VK  TVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+V+VVNDSGGVKNASHLLKYDS+LGTFKA+VKI++NETI+VDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ           ++   + TYV+G
Sbjct:    1 MATHAALASTRIPTNTRFPSKTSHSFPSQCASKRLEVGEFSGLKSTSCISYVHSARDSSFYDVVAAQLTSK-ANGSTAVKGVTVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKAEVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVIG 220          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.153e-83
Identity = 162/227 (71.37%), Postives = 184/227 (81.06%), Query Frame = 2
Query:   95 MASHSALAPSRIPAITRIPSKTT--HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQL-VPXSYYHCSSQRCRLSTYVVGFTRK 766
            MASH+ALAPSRIPA TR+ SK +  +SF TQCS KRLDVA+F+GLR++   T+    R+ASF D + AQLT K   G+ PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK+A+HLLKYDS+LGTFKADVKI+DNET S+DGK IKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ           ++   + TYVVG   K
Sbjct:    1 MASHAALAPSRIPASTRLASKASQQYSFLTQCSFKRLDVADFSGLRSSNSVTFT---REASFHDVIAAQLTTK-PTGAAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEK 223          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.959e-74
Identity = 144/192 (75.00%), Postives = 161/192 (83.85%), Query Frame = 2
Query:  182 CSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQL-VPXSYYHCSSQRCRLSTYVVG 754
            C +K+ +VAEFAGLR++   T++   +++SFFD V+AQLTPK    S PVK ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDS+LGTFKADVKIVDNETISVDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ           ++   + TYVVG
Sbjct:    1 CLSKKFEVAEFAGLRSSGCVTFSN--KESSFFDVVSAQLTPKTTR-STPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVG 189          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.909e-52
Identity = 110/185 (59.46%), Postives = 129/185 (69.73%), Query Frame = 2
Query:  203 VAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQLVPXSYYHCSSQRCRLSTYVVG 754
            ++EF+GLR++A       A    F  AV+ + T  V     P +  T AKLKVAINGFGRIGRNFLRCWHGR D SPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V +  ISVDGK+IKVVS+R+P  LPW ELGID+VIEGTGVFVD  GAGKHIQ         +  +  + TYVVG
Sbjct:   19 LSEFSGLRSSASLPMRRNATSDDFMSAVSFR-THAVGTSGGPRRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVG 202          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 108/190 (56.84%), Postives = 130/190 (68.42%), Query Frame = 2
Query:  206 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQLVPXSYYHCSSQRCRLSTYVVGFTRKSRT 775
            +EF+GL  ++      G+ D   F  V+ Q T  V            AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVV+ND+GGVK ASHLLKYDS+LGTF ADVK   +  ISVDGK+IKVVS+R+P+ LPW ++GID+VIEGTGVFVD  GAGKH+Q         +  +  + TYVVG   +  T
Sbjct:   21 SEFSGLHTSSLPFGRKGSDDLMAF--VSFQ-TNAVGGKRSSQNGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYT 207          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.062e-50
Identity = 107/184 (58.15%), Postives = 130/184 (70.65%), Query Frame = 2
Query:  206 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQLVPXSYYHCSSQRCRLSTYVVG 754
            +EF+GLR ++   +     D     +V A  T  +  G+   K+  V AKLKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V  + ISVDGK+I+VVS+R+P+ LPW +LGID+VIEGTGVFVD  GAGKHIQ         +  +  + TYVVG
Sbjct:   12 SEFSGLRTSSAIPFGRKTNDDLL--SVVAFQTSVIGGGNS--KRGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVG 191          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 3.518e-50
Identity = 104/182 (57.14%), Postives = 126/182 (69.23%), Query Frame = 2
Query:  209 EFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQLVPXSYYHCSSQRCRLSTYVVG 754
            EF+GLR+++ +        +  F ++ +  T  + +     K  T AKLKVAINGFGRIGRNFLRCWHGRKDSPLD++ +ND+GGVK ASHLLKYDS LG F ADVK      ISVDGK+I+VVSNR+P  LPW ELGIDIVIEGTGVFVD  GAGKHI+         +  +  + TYVVG
Sbjct:   14 EFSGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSGGYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVG 195          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.635e-49
Identity = 106/191 (55.50%), Postives = 126/191 (65.97%), Query Frame = 2
Query:  206 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAK-LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQLVPXSYYHCSSQRCRLSTYVVGFTRKSRT 775
            +EF+GLR ++     +      F   VT Q     ++G         AK LKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V  + ISVDGK+IKVVS+R+P  LPW ELGID+VIEGTGVFVD  GAG+HI          +  +  + TYVVG    + T
Sbjct:   21 SEFSGLRNSSRHLPFSRKSSDDFHSLVTFQTNAVGSSGGHKKSLVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVGVNADAYT 211          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.860e-48
Identity = 94/128 (73.44%), Postives = 107/128 (83.59%), Query Frame = 2
Query:  305 KVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            K A   V V+ E   K++VAINGFGRIGRNFLRCWHGR+++ LDVV +NDSGGVK ASHLLKYDS LGTF ADVKIVD+  ISVDGK IK+VS+RDPLQLPW E+ ID+VIEGTGVF+D  GAGKHIQ
Sbjct:   24 KAARAVVDVRAEK--KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQ 149          

HSP 2 Score: 22.3274 bits (46), Expect = 5.860e-48
Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 3
Query:  699 KVIITAPAKGADFQPMSLDLRE 764
            KV+ITAPAK  D     + + E
Sbjct:  154 KVLITAPAKDKDIPTFVVGVNE 175          
The following BLAST results are available for this feature:
BLAST of EY736436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
G3PB_ARATH1.689e-8478.39Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_PEA3.724e-8471.04Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_SPIOL3.153e-8371.37Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_TOBAC5.959e-7475.00Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PA_MAIZE4.909e-5259.46Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SPIOL1.209e-5056.84Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_TOBAC2.062e-5058.15Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_ARATH3.518e-5057.14Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_PEA6.635e-4955.50Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_CHLRE5.860e-4873.44Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-C10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736436 ID=EY736436; Name=EY736436; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGCTGAATTTAACCGCATAAATAGCTAGGAGAACTTAGTCTC
TCAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGGCC
AGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATTCC
ATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCTGG
ATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACGCC
ACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTTAC
TCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGCCA
AATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCCTC
CGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTCAA
TGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTCAT
TGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCATC
TCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTCCA
GCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAAGGGACAGGAG
TTTTTGTGGACGGGCCTGGTGCTGGAAAGCACATCCAGCTGGTGCCANAA
AGTTATTATCACTGCTCCAGCCAAAGGTGCAGACTTTCAACCTATGTCGT
TGGATTTACGAGAAAGAGTAGAACCCAAGGGTGCAACCTTGGGAGGTCAA
TGTATCGGGCCTTGTAATGAAATGGGCACTCTTTCCCGTGCATTAGCTTG
TTAACGAGTTGGGGTCGCGGCAAGGGTCT
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