EY736429

Overview
NameEY736429
Unique NameEY736429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY736429 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 40.0466 bits (92), Expect = 1.140e-11
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  432 QNKQV*THGHDASSHWIWKL 491
            +NK V THGHDA++HWIWKL
Sbjct:  538 ENKFVYTHGHDATTHWIWKL 557

HSP 2 Score: 39.2762 bits (90), Expect = 1.140e-11
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 2 
Query:  308 K*NSLPD--RKTYASRTSILYNKAGMLMPINIELSVAPS 418
            K NS+ +  RKTYASRT   Y+K G L P+ IELS+ P+
Sbjct:  496 KINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSLPPT 534

HSP 3 Score: 30.8018 bits (68), Expect = 1.140e-11
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 1 
Query:  241 QAIEEKRLCILDDHDSLRPCIEKM 312
            +A+EEKRL ++D HD L P +EK+
Sbjct:  474 KALEEKRLFLVDYHDILLPFVEKI 497
The following BLAST results are available for this feature:
BLAST of EY736429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LOX6_ARATH1.140e-1175.00Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-C02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736429 ID=EY736429; Name=EY736429; organism=Citrus sinensis; type=EST; length=948bp
GGGCGGGGGGGGGCCCGCGTAATAACGTCGNTANCCTTGCAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCACGCAGTGCGGCATATCCCACGGTTTAG
GATCTTCCTTTGATTCTCATCATGATATTGGTCTACTTGAGACACCACCA
AACACAATGCTTATATCCAAGGAAAATATATCGTCATGGCTCTTCGTACA
TGTACGGAATTCCAGTGATAACTCGGACTATCTGATGATACAGGCTATTG
AGGAAAAAAGATTGTGTATACTTGATGATCATGACTCGCTGAGGCCATGT
ATCGAGAAAATGAAACTCCTTGCCAGATAGAAAAACATATGCGTCTAGGA
CAAGTATCTTGTATAACAAGGCTGGCATGCTGATGCCAATAAATATAGAG
CTATCCGTTGCTCCATCACAATTCTTCGCCTCAGAATAAACAGGTTTAAA
CTCATGGGCATGATGCTTCATCACATTGGATCTGGAAGCTGCGCGCAAGC
TCATGGTCGGTGGCAACGATGATGAAATCCTCCAAGTATTAAATAATGGT
TGAAGAATCCGGCCTCTATAGAACCTTAGTGTATTGGCACACGGGAATGG
TTAGTTCAATGCCCCCTGATGATGAGTGGGTGTGGAGTTAGATCCGCTCA
CACTCCAAATCAGTGGACCCCCCCCCCCCACCGCAAGAAAACTGCTGGCA
TATATAAAAAGGCTGGTGAAGGAGAGGAAGGGGAGGCATATGGAGTGCGG
GTGTGAGCGGCAGAAGAAGAGAAAGCGCGGCCGGACGGAGGCCGCGGGCC
GGGGTGGAGTGACGGGGGGGGGTCGTTAGGGAGGGGGGGGAATAAATGAT
GAAAAACAAAGATACATCGAAGTTTATCCATAAATGTAGTCTTCAGCCAG
ACGCTCAACCTATCACTAAGCAGAAATACGCCTACAGATCCAACTAAA
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