EY736407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736407 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 4.456e-21 Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 3 Query: 381 PTLPTNFEEDTWXXXXXXXXXXXXXQPTSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMMRGIPLYLNRTYVKQH-QCGVIVGHGIGLFRKYFL 773 P LP N+ ++TW +LE+LYQAV +LC +K+ NLY+++ + CE+HI A I S D V+FL ++RCWQ+ C QM+M+R I L+L+RTYV Q+ I G+ LFR + + Sbjct: 188 PKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHII 319
BLAST of EY736407 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.601e-21 Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 381 PTLPTNFEEDTWXXXXXXXXXXXXXQPTSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMMRGIPLYLNRTYVKQH-QCGVIVGHGIGLFRKYFLHIRN-EAPTVHG 806 P LP N+ +DTW +LE+LYQAV +LC HK+ LY+++ + CE+H+ A I S D V+FL + CWQD C QM+M+R I L+L+RTYV Q+ I G+ LFR + + R ++ T+ G Sbjct: 52 PRLPDNYTQDTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDG 195
BLAST of EY736407 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20 Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 381 PTLPTNFEEDTWXXXXXXXXXXXXXQPTSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLVERCWQDLCDQMLMMRGIPLYLNRTYVKQHQ-CGVIVGHGIGLFRKYFL 773 P LP N+ +DTW +LE+LYQAV +LC HK+ LY+++ + CE+H+ A I S D V+FL + CWQD C QM+M+R I L+L+RTYV Q+ I G+ LFR + + Sbjct: 52 PRLPDNYTQDTWRKLHEAVRAVQSSTSIRYNLEELYQAVENLCSHKVSPMLYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRTHII 183
BLAST of EY736407 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15 Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 381 PTLPTNFEEDTWXXXXXXXXXXXXXQPTSCDLEKLYQAVNDLCLHK-MGGNLYQRIEKECEEHISAAIRSLV-GQSPDLVVFLSLVERCWQDLCDQMLMMRGIPLYLNRTYVKQHQCGVIVGHGIGLF 758 P P N+E+ +W Q T+ E+LY+ V +LC K + NLY +I + E+HI+ I+ LV S D ++FL + W+D +QM+M+R I LYL+RTYV Q+ V +GLF Sbjct: 60 PKTPDNYEDSSWNKLSSAITSINMKQATTLTQEELYKMVENLCFDKILASNLYNKISVQIEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTVKSIWDLGLF 187 The following BLAST results are available for this feature:
BLAST of EY736407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736407 ID=EY736407; Name=EY736407; organism=Citrus sinensis; type=EST; length=876bpback to top |