EY736399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736399 vs. ExPASy Swiss-Prot
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 419 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIAIPHPSKKSAKNPASRDRRKQQP 616 TPKKAE +K+R +SA+KT V DKKAK TPQKT+ KKG H+A PHPSK+++K P S +P Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTPKSAGSHHCKP 246
BLAST of EY736399 vs. ExPASy Swiss-Prot
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.267e-12 Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 419 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIAIPHPSKKSAKNPASRDRRKQQPHESGGS 634 TPKK E+ KKR E+A KT + DKKAK TP QKT KKG +H+A PHP+K K PA+ D+ ++ +SGGS Sbjct: 205 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKSGGS 276
BLAST of EY736399 vs. ExPASy Swiss-Prot
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 2 Query: 419 TPKKAESSKKRPVE-SASKTYVPDKKAKFVTPQKTEEKKGVSHIAIPHPSKKSAKN----PASRDRRKQQPHESGGSF 637 TPKK E KKR E ++SK +KKAKFVTPQKT+ KK H+A PHPSK++ KN ++QQ +S G+F Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAF 267
BLAST of EY736399 vs. ExPASy Swiss-Prot
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 425 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIAIPHPSKKSAKNPASRDRRKQQPHESG 628 KK + KKRP ESA+KT + KKAK TP+KT+ KK V H+A PHPSKK K P S + Q P+ +G Sbjct: 203 KKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSV-HVATPHPSKKGGKTPNS--TKGQTPNSAG 267 The following BLAST results are available for this feature:
BLAST of EY736399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736399 ID=EY736399; Name=EY736399; organism=Citrus sinensis; type=EST; length=886bpback to top |