EY736398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 6.640e-62 Identity = 131/208 (62.98%), Postives = 150/208 (72.12%), Query Frame = 2 Query: 170 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNLL----------FRNIKTIAECLADELINAAKGSSNSYAIXRK 763 MATA ++ +VKLFNRWT++DV V DISL DYIGVQAAKHAT+VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NP+QVI+DA+V +G ED A+ G + ++ D+S + + FRNIKTIAECLADELINAAKGSSNSYAI +K Sbjct: 1 MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPRED------------ATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 196
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 4.304e-61 Identity = 128/198 (64.65%), Postives = 148/198 (74.75%), Query Frame = 2 Query: 200 DPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNL----------LFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 DP+Q +VKLFNRW+F+DVQ++D+SL DYIGV +KHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLLTD NP+QVIVDAVV +G ED A+ G + ++ D+S + + FRNIK+IAECLADELINAAKGSSNSYAI +K Sbjct: 3 DPTQ--IEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPRED------------ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKK 186
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.588e-61 Identity = 128/208 (61.54%), Postives = 149/208 (71.63%), Query Frame = 2 Query: 170 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNLL----------FRNIKTIAECLADELINAAKGSSNSYAIXRK 763 MA + ++ Q +VKLFNRW+F+DV V DISL DYIGVQ +KHAT+VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NP+QVI+DA+V +G ED A+ G + ++ D+S + + FRNIKTIAECLADELINAAKGSSNSYAI +K Sbjct: 1 MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPRED------------ATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 196
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4) HSP 1 Score: 211.46 bits (537), Expect = 5.096e-54 Identity = 118/203 (58.13%), Postives = 141/203 (69.46%), Query Frame = 2 Query: 176 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNL-------LFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT NPLQV+V+A++ +G ED+ R G + + S L + W L FRNIKTIAECLADELINAAKGSSNSYAI +K Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGR---------AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3) HSP 1 Score: 211.46 bits (537), Expect = 5.096e-54 Identity = 118/203 (58.13%), Postives = 141/203 (69.46%), Query Frame = 2 Query: 176 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNL-------LFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT NPLQV+V+A++ +G ED+ R G + + S L + W L FRNIKTIAECLADELINAAKGSSNSYAI +K Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGR---------AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3) HSP 1 Score: 208.764 bits (530), Expect = 3.303e-53 Identity = 113/188 (60.11%), Postives = 134/188 (71.28%), Query Frame = 2 Query: 221 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNL-------LFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT NPLQV+V+A++ +G ED+ R G + + S L + W L FRNIK IAECLADELINAAKGSSNSYAI +K Sbjct: 16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGR---------AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKK 193
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 204.912 bits (520), Expect = 4.770e-52 Identity = 115/203 (56.65%), Postives = 138/203 (67.98%), Query Frame = 2 Query: 176 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNL-------LFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT NPLQV+V+A++ +G ED+ R G + + S L + W L FRNIKTIAECLADELINA KGSSNSYAI +K Sbjct: 6 TATPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGR---------AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKK 193
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.004e-50 Identity = 115/205 (56.10%), Postives = 138/205 (67.32%), Query Frame = 2 Query: 170 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNL-------LFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 + T VV+ ++ P ++KLF RW+ +DV VNDISL DYI V+ K A Y+PH+AGRY+ KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+ EIIHLLT NPLQ++V A++ +G ED+ R G + + S L + W L FRNIKTIAECLADELINAAKGSSNSYAI +K Sbjct: 28 LETNVVSTTELP-----EIKLFGRWSCDDVTVNDISLQDYISVKE-KFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGR---------AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 217
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.696e-49 Identity = 106/188 (56.38%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 221 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWCSWNLL-------FRNIKTIAECLADELINAAKGSSNSYAIXRK 763 D+KLF +W E + ++DISL+DYI V+ HA Y+PHTA RY+VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV+H+ EI+HLLT NPLQ++ +A+ +G ED+ R G + + + L + W L FRNIK+IAECLADELINAA+GSSNSYAI +K Sbjct: 22 DIKLFGKWPLEGLNISDISLTDYIAVKD-NHAVYLPHTAARYAVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHSFEIMHLLTGENPLQLVCEAISNSGPREDSTRIGR---------AGTVRRQAVDVAPLRRVNQAIWLLCTGAREASFRNIKSIAECLADELINAARGSSNSYAIKKK 199
BLAST of EY736398 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.696e-49 Identity = 107/187 (57.22%), Postives = 132/187 (70.59%), Query Frame = 2 Query: 224 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDHNPLQVIVDAVVINGRSEDNMLPYRICWCC*ASGCGYLPIAPCESSDLSNHHWC-------SWNLLFRNIKTIAECLADELINAAKGSSNSYAIXRK 763 VKLFNRW++EDV++ DISL+DYI +++ Y+PH+AGRY+ KRFRKA CPI+ERLTNSLMMHGRNNGKKLMAVRIV HA EIIHL+TD NP+Q+ VDA+V G ED+ RI G + + S L + + FRN+K+IAECLA+ELINAAKGSSNSYAI +K Sbjct: 28 VKLFNRWSYEDVEIRDISLTDYIQIRSP---VYLPHSAGRYAAKRFRKANCPIIERLTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDST---RI------GSAGTVRRQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAKGSSNSYAIKKK 202 The following BLAST results are available for this feature:
BLAST of EY736398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736398 ID=EY736398; Name=EY736398; organism=Citrus sinensis; type=EST; length=864bpback to top |