EY736397

Overview
NameEY736397
Unique NameEY736397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736397 vs. ExPASy Swiss-Prot
Match: ABA2_PRUAR (Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.689e-47
Identity = 82/140 (58.57%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  124 RMINLMWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFPRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQA 543
            R I+  W+L+P G +N  SQ I L+   +N P +IGS  H D    SI IP  QVS+MHARISYKDGAFYL DL+SEHGT++ D EG+RYRV  NFPARFRPSD IE GS K A FRVKV+ + P   S  KE   ILQA
Sbjct:  527 RAIDGEWYLIPCGQDNDASQLICLNRDEKN-PCIIGSAPHGDVSGISIAIPKPQVSEMHARISYKDGAFYLTDLRSEHGTWIADIEGKRYRVPPNFPARFRPSDAIEIGSQKVA-FRVKVMKSSP--GSVEKEG--ILQA 660          

HSP 2 Score: 67.3958 bits (163), Expect = 2.689e-47
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 2
Query:    8 SAKLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGE 121
            S+KLEGRSP C+LSDKASD LR WF DDDALERA++GE
Sbjct:  495 SSKLEGRSPSCRLSDKASDQLRNWFEDDDALERAIDGE 532          
BLAST of EY736397 vs. ExPASy Swiss-Prot
Match: ABA2_NICPL (Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.717e-46
Identity = 79/137 (57.66%), Postives = 95/137 (69.34%), Query Frame = 1
Query:  124 RMINLMWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFPRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNN--NSERKEAG 528
            R  +  W L+P+G+ N   + + LS   EN P  IGS SH + P  S+VIP  QVS+MHARISYK GAF++ DL+SEHGT++TDNEGRRYR S NFP RF PSD IEFGSDKKA FRVKV+  PP      ER+  G
Sbjct:  526 RATDAEWLLLPAGNSNAALETLVLS-RDENMPCNIGSVSHANIPGKSVVIPLPQVSEMHARISYKGGAFFVTDLRSEHGTWITDNEGRRYRASPNFPTRFHPSDIIEFGSDKKAAFRVKVMKFPPKTAAKEERQAVG 661          

HSP 2 Score: 53.5286 bits (127), Expect = 1.717e-46
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 2
Query:   14 KLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGE 121
            KLEGR   C+LS+KA+D LR WF DDDALERA + E
Sbjct:  496 KLEGRIQHCRLSEKANDQLRNWFEDDDALERATDAE 531          
BLAST of EY736397 vs. ExPASy Swiss-Prot
Match: ABA2_SOLLC (Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 6.306e-43
Identity = 79/140 (56.43%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  124 RMINLMWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFPRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPPNNNSERKEAGEILQA 543
            R  +  W L+P+G+ +   + I LS   E+ P  +GS SH + P  SIV+P  QVS+MHARIS KDGAF++ DL+SEHGT+VTDNEGRRYR S NFP RF PSD IEFGSD KA FRVK +   P   SERKE  E ++A
Sbjct:  532 RATDAEWLLLPAGNGSSGLEAIVLS-RDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSD-KAAFRVKAMKF-PLKTSERKEEREAVEA 668          

HSP 2 Score: 53.1434 bits (126), Expect = 6.306e-43
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 2
Query:   14 KLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGE 121
            KLEGR   C+LS+KA+D LR WF DDDALERA + E
Sbjct:  502 KLEGRIKHCRLSEKANDQLRKWFEDDDALERATDAE 537          
BLAST of EY736397 vs. ExPASy Swiss-Prot
Match: ABA2_CAPAN (Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.508e-37
Identity = 66/125 (52.80%), Postives = 80/125 (64.00%), Query Frame = 1
Query:  124 RMINLMWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFPRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPP 498
            R  +  W L+P+G+ N   + + LS   EN P  IGS SH + P  S+VIP +QVS MHARISY  GAF     +S+HGT+  DNEGRRYRVS NFP RF  SD I FGSD KA FR+K +   P
Sbjct:  524 RATDAEWLLLPAGNSNAALETLVLS-RDENMPCTIGSVSHANIPGKSVVIPLSQVSDMHARISYNGGAFLGTAFRSDHGTWFIDNEGRRYRVSPNFPMRFHSSDVIVFGSD-KAAFRIKAMKFAP 646          

HSP 2 Score: 53.5286 bits (127), Expect = 3.508e-37
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 2
Query:   14 KLEGRSPCCKLSDKASDNLRTWFRDDDALERAMNGE 121
            KLEGR   C+LS+KA+D LR WF DDDALERA + E
Sbjct:  494 KLEGRIQHCRLSEKANDQLRNWFEDDDALERATDAE 529          
The following BLAST results are available for this feature:
BLAST of EY736397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ABA2_PRUAR2.689e-4758.57Zeaxanthin epoxidase, chloroplastic OS=Prunus arme... [more]
ABA2_NICPL1.717e-4657.66Zeaxanthin epoxidase, chloroplastic OS=Nicotiana p... [more]
ABA2_SOLLC6.306e-4356.43Zeaxanthin epoxidase, chloroplastic OS=Solanum lyc... [more]
ABA2_CAPAN3.508e-3752.80Zeaxanthin epoxidase, chloroplastic OS=Capsicum an... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-G11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736397 ID=EY736397; Name=EY736397; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGCAAAACTTGAAGGTAGGTCACCGTGTTGCAAGCTCTCGG
ACAAGGCAAGTGACAACTTACGAACATGGTTTCGTGACGATGACGCATTG
GAGCGTGCTATGAATGGAGAGTGCGTATGATAAACCTTATGTGGTTTCTA
GTACCATCTGGAAGTGAGAATGTTGTTTCGCAGCCTATTTATTTAAGTGT
ATCACATGAGAATGAACCCTATTTAATTGGAAGTGAAAGTCACGAGGATT
TTCCTCGAACATCGATTGTGATCCCTTCAGCGCAGGTGTCCAAAATGCAT
GCTCGTATCAGCTATAAAGATGGTGCCTTCTACCTGATTGATTTGCAGAG
CGAACATGGAACCTATGTCACAGACAATGAAGGGCGAAGGTATAGGGTAT
CTTCAAACTTTCCTGCTCGGTTTCGTCCGTCAGACACTATTGAGTTTGGC
TCTGATAAAAAGGCAATTTTTCGGGTTAAGGTGATCGGAACTCCTCCAAA
TAATAATTCAGAGAGAAAGGAAGCGGGTGAAATTCTTCAGGCAGTGTAAA
ATATCTGAAGTTAGTCATTTGTTTATCGGAGTATACAGGAAGAGGAATTG
TACAGCATGTATTGGCGCACTAATGCAAGTCTGATGCCCTGCCTTGTATC
AAATGTACGATCGGAGTAGAGAGCCCGCCCCACAAATGTCCTACTCCCAC
CTAAAGCTGCTTTGTGTCACGGAAACCCGGGACCTTGAGTCTCGTGGCAT
TTCATCCCTATCCCAGCAACCATTGGCCTGAACCAAAGAAAAAAGGGCGG
CCCCTCTCAAGGATCCACCCTACGTTACCCTTCCCTCCAACCTTCTCTCC
CC
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