EY736394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 307.76 bits (787), Expect = 1.673e-87 Identity = 159/178 (89.33%), Postives = 170/178 (95.51%), Query Frame = 2 Query: 209 FAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 F V+A+AKDIAFDQ SR+AMQAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLL+VTSGANPVS+K+GIDKTV LVEELEK ARP++G DDIKAVATISAGNDELIG MIA+AIDKVGPDGVL Sbjct: 43 FVVKAAAKDIAFDQHSRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLNVTSGANPVSIKKGIDKTVAALVEELEKLARPVKGGDDIKAVATISAGNDELIGKMIAEAIDKVGPDGVL 220 HSP 2 Score: 37.3502 bits (85), Expect = 1.673e-87 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 +VEEGMEIDRG+ISPQFV Sbjct: 233 EVEEGMEIDRGYISPQFV 250
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 3.714e-87 Identity = 159/178 (89.33%), Postives = 169/178 (94.94%), Query Frame = 2 Query: 209 FAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 F+VRA+ K+I+FDQ SRAA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL D MENAGAALIREVASKTNDSAGDGTTTASVLAREIIK GLLSVTSGANPVSLKRGIDKTV L+EELEKRARP++G DIKAVATISAGNDEL+GTMIADAIDKVGPDGVL Sbjct: 2 FSVRANVKEISFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARPVKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVL 179 HSP 2 Score: 37.3502 bits (85), Expect = 3.714e-87 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 +VEEGMEIDRG+ISPQFV Sbjct: 192 EVEEGMEIDRGYISPQFV 209
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 304.294 bits (778), Expect = 1.829e-86 Identity = 155/178 (87.08%), Postives = 171/178 (96.07%), Query Frame = 2 Query: 209 FAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 F+VRA+ K+IAFDQ SRAA+QAGIDKL+D VGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL + MENAGAALIREVASKTNDSAGDGTTTAS+LAREIIK GLLSVTSGANPVSLKRGIDKTV GL+EEL+K+ARP++GRDDI+AVA+ISAGND+LIG+MIADAIDKVGPDGVL Sbjct: 42 FSVRANVKEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKARPVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVL 219 HSP 2 Score: 37.3502 bits (85), Expect = 1.829e-86 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 +VEEGMEIDRG+ISPQFV Sbjct: 232 EVEEGMEIDRGYISPQFV 249
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 1.176e-85 Identity = 157/177 (88.70%), Postives = 167/177 (94.35%), Query Frame = 2 Query: 209 FAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGV 739 F++RA+ K+IAFDQ SRAA+QAGIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIEL D MENAGAALIREVASKTNDSAGDGTTTASVLAREIIK GLLSVTSGANPVSLKRGIDKTV L+EELEKR+RP++G DIKAVATISAGNDELIG MIADAIDKVGPDGV Sbjct: 41 FSLRANVKEIAFDQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRSRPVKGGRDIKAVATISAGNDELIGAMIADAIDKVGPDGV 217 HSP 2 Score: 37.3502 bits (85), Expect = 1.176e-85 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 +VEEGMEIDRG+ISPQFV Sbjct: 231 EVEEGMEIDRGYISPQFV 248
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.078e-83 Identity = 149/174 (85.63%), Postives = 168/174 (96.55%), Query Frame = 2 Query: 221 ASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 A AK+IAFDQ+SRAA+QAG++KL++AVG+TLGPRGRNVVLDE+G+PKVVNDGVTIARAIELA+PMENAGAALIREVASKTNDSAGDGTTTA VLAREIIKLG+LSVTSGANPVSLK+GIDKTV GL+EELE++ARP++G DIKAVA+ISAGNDELIG MIADAIDKVGPDGVL Sbjct: 2 ADAKEIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGNPKVVNDGVTIARAIELANPMENAGAALIREVASKTNDSAGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLIEELERKARPVKGSGDIKAVASISAGNDELIGAMIADAIDKVGPDGVL 175 HSP 2 Score: 36.965 bits (84), Expect = 1.078e-83 Identity = 16/17 (94.12%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 783 VEEGMEIDRGFISPQFV 833 VEEGMEIDRG+ISPQFV Sbjct: 189 VEEGMEIDRGYISPQFV 205
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 9.036e-83 Identity = 149/162 (91.98%), Postives = 159/162 (98.15%), Query Frame = 2 Query: 257 RAAMQAGIDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 R A+Q+GIDKL+DAVGLTLGPRGRNVVLDEFGSPKVVN+GVTIARAIEL DPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KRGIDKTV GL+EELEK+ARP++GRDDIKAVA+ISAGNDELIGTMIADAIDKVGPDGVL Sbjct: 1 RTALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVL 162 HSP 2 Score: 37.3502 bits (85), Expect = 9.036e-83 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 +VEEGMEIDRG+ISPQFV Sbjct: 175 EVEEGMEIDRGYISPQFV 192
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.395e-67 Identity = 121/175 (69.14%), Postives = 151/175 (86.29%), Query Frame = 2 Query: 221 ASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 A AK+I FDQ SR +QAGI+K++DAVG+TLGPRGRNVVL++ FG P+V+NDGV+I RAIEL DP+ENAGA LI+EVA +TND+AGDGTTTASVLARE+I GL SVT+GANP+++KRG+DKT LV +L++ A+P++GRDDIK VA+ISAGND IG MIADA+DKVG +GVL Sbjct: 34 ADAKEIVFDQESRRRLQAGINKVADAVGVTLGPRGRNVVLEQKFGVPQVINDGVSIRRAIELKDPVENAGAQLIKEVAGRTNDAAGDGTTTASVLAREMIHYGLQSVTAGANPIAVKRGLDKTAEYLVAKLKEHAKPVKGRDDIKNVASISAGNDNAIGEMIADALDKVGSNGVL 208 HSP 2 Score: 36.1946 bits (82), Expect = 4.395e-67 Identity = 15/18 (83.33%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 +V+EGMEIDRG+ISPQFV Sbjct: 221 EVQEGMEIDRGYISPQFV 238
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 7.286e-58 Identity = 106/173 (61.27%), Postives = 144/173 (83.24%), Query Frame = 2 Query: 227 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 AK + FD+ SR A++ G++ L+DAV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ +EL DP+ENAGA L+REVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANPV+L++GIDKT+ LV+E+E +++P+ G D I VATISAGND +G MIA A+DKVG DGV+ Sbjct: 2 AKHVVFDEESRRALERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGAQLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPVAG-DAIAQVATISAGNDTEVGQMIAQAMDKVGKDGVI 173 HSP 2 Score: 30.8018 bits (68), Expect = 7.286e-58 Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 780 KVEEGMEIDRGFISPQFV 833 ++ EGM+IDRG+ISP FV Sbjct: 186 EIVEGMQIDRGYISPYFV 203
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.893e-56 Identity = 108/173 (62.43%), Postives = 142/173 (82.08%), Query Frame = 2 Query: 227 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 AK I FD+ +R A++ G++ L+DAV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL DP+EN GA LIREVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANP+SLKRG++KTV LV+E+ A+P+E I VATIS+GNDE IG MIA+A+DKVG +GV+ Sbjct: 2 AKMIVFDETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVEDNKTIAEVATISSGNDEEIGQMIAEAMDKVGKEGVI 174 HSP 2 Score: 27.7202 bits (60), Expect = 3.893e-56 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 783 VEEGMEIDRGFISPQFV 833 V EGM+ D+G++SP FV Sbjct: 188 VVEGMQFDKGYVSPYFV 204
BLAST of EY736394 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.125e-55 Identity = 103/173 (59.54%), Postives = 142/173 (82.08%), Query Frame = 2 Query: 227 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVL 742 AK I F + +R A++ GI++L+DA+ +T+GP+GRNVVL++ FG+P++VNDGVTIA+ IELADP+EN GA L+REVASKTND AGDGTTTA++LA+ +++ GL ++++GANPV+L+RGI+KT LVE++ A+P+EGR I VATISAGND +G MIA A+D VG DGV+ Sbjct: 2 AKRILFREEARKALEQGINQLADAIKVTIGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVASKTNDVAGDGTTTATILAQSMVREGLKNISAGANPVALRRGIEKTTAYLVEQIAAHAKPVEGRKTIAEVATISAGNDSEVGEMIAKAMDAVGRDGVI 174 HSP 2 Score: 29.261 bits (64), Expect = 1.125e-55 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 783 VEEGMEIDRGFISPQFV 833 V EGM+ DRG+ISP FV Sbjct: 188 VVEGMQFDRGYISPYFV 204 The following BLAST results are available for this feature:
BLAST of EY736394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736394 ID=EY736394; Name=EY736394; organism=Citrus sinensis; type=EST; length=836bpback to top |