EY736388

Overview
NameEY736388
Unique NameEY736388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 54/169 (31.95%), Postives = 89/169 (52.66%), Query Frame = 2
Query:   32 LILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTPTAAIRGCRSNSRGRGPRTAMQPGV 538
            L+++SGLL NP +    +S+C+  +        GL AA+S RVSNELGAGN +   +SV  V    V  + V+   +   R      F+++ +V+  V+ + PL+ +S+ ++ +  + SGVA G GW  + A+VNL   Y+   P   + G +++    G    M  GV
Sbjct:  297 LVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGV 465          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.979e-18
Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTPTAAI 478
            FEL+   SG+L   +L  + +SV   T    Y + +G+ AA +TRV N +GAGN +  +++ +  + +     ++++  LF +R  + Y+F+++K VV  V T+ PLV L  I D+   V  G+ RG G   I   VN  A YL   P A I
Sbjct:  340 FELVTFASGVLGTTEL--ASMSVLSTTSTLSYNLAFGVAAAAATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLGLPVAII 489          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16
Identity = 51/148 (34.46%), Postives = 72/148 (48.65%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTP 466
            FE++ L++G L    L     SV + T Q L  IP+GLG   S RV+  LGAG      ++      + V    V+  T+ A R ++G +F+N+  V+  V  + PLV    I DSL     G  RG G   + A VN+ A YL   P
Sbjct:  249 FEIVALVAGKLGAVPLAAQ--SVIMTTDQLLNTIPFGLGIITSNRVAYYLGAGLPDNASLTAKVAAIVGVAVGSVIMITMIAVRNIYGRIFTNDPDVIQLVALVMPLVAAFQISDSLNGTMGGALRGTGRQKVGAIVNITAYYLFALP 394          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVN 436
            FE+   ++GL+   +L     +V        Y +P+G G A S RV N LGAGN  + R S   V+  A    ++V   L A + V  Y+F+N+K ++  V+ + P+     + D+LA  C GV RG G   I A +N
Sbjct:  286 FEIGTFLAGLVNVTELGAQ--AVIYELASVAYMVPFGFGVAASVRVGNALGAGNADQARCSCTTVLLCAGVCALLVGILLAALKDVVAYIFTNDKDIISLVSQVMPIFAPFHLFDALAGTCGGVLRGTGKQKIGAVLN 421          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.761e-14
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTP 466
            +E+   +SG+L    +E    SV       +Y IP GL  AV+ RV N LGAGN+++ + S    + +     +V    L + + + GY+F++++ ++  V  +TP+  +S + +SLA    G+ RG G     A VN    Y+   P
Sbjct:  276 YEIGSFLSGILG--MVELGAQSVTYELAVIVYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDIIALVAQVTPIYAVSHLFESLAGTSGGILRGSGNQKFGAIVNAIGYYVVGLP 421          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.339e-13
Identity = 45/150 (30.00%), Postives = 76/150 (50.67%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVS--ATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTP 466
            +E+   +SG+L   +L    ++  L  I  +Y IP G   A + RV N LGAGN+ + + S  + + + VTE   V+    L   + + GY+F+ ++ +V  V  + P+  +S + + LA  C G+ RG G   + A VN    Y+   P
Sbjct:  277 YEVGSFLSGILGMVELGAQSITYELAII--VYMIPSGFSVAANVRVGNALGAGNIDQAKKS--SAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIGLP 422          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13
Identity = 46/150 (30.67%), Postives = 76/150 (50.67%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVS--ATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTP 466
            +E+   +SG+L   +L    ++  L  I  +Y IP G   A + RV N LGAGN+ + + S  + + + VTE   V+    L   + + GY+F+ +  +V  V  + P+  +S + ++LA  C GV RG G   + A VN    Y+   P
Sbjct:  276 YEVGSFLSGILGMVELGAQSITYELAII--VYMIPAGFSVAANVRVGNALGAGNIDQAKKS--SAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIVALVAQVVPIYAVSHLFEALACTCGGVLRGTGNQKVGAIVNAIGYYVIGLP 421          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTP 466
            +E+   +SG+L    +E    S+       +Y +P G   A S RV N LGAG++++ R S    + + V   +  S  L + +   GY+F+ ++ +++ V  + P+  +S + ++LA    GV RG G   + A VN    Y+   P
Sbjct:  277 YEVGSFLSGILG--MVELGAQSIVYELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLP 422          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTP 466
            +E+   +SG+L    +E    S+       +Y +P G   A S RV N LGAG++++ R S    + + V   +  S  L + +   GY+F+ ++ +++ V  + P+  +S + ++LA    GV RG G   + A VN    Y+   P
Sbjct:  277 YEVGSFLSGILG--MVELGAQSIVYELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLP 422          
BLAST of EY736388 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 41/149 (27.52%), Postives = 73/149 (48.99%), Query Frame = 2
Query:   23 FELLILMSGLLPNPQLETSGLSVCLNTIQTLYAIPYGLGAAVSTRVSNELGAGNVQKTRVSVYAVVFMAVTETMVVSATLFASRRVFGYVFSNEKQVVDYVTTMTPLVCLSVIMDSLARVCSGVARGCGWHNIAAFVNLGACYLCRTPT 469
            +E+   ++GL+   +L    +   L TI   Y  P G   A S RV N LGAGN ++ ++S    +   V  + VV+  +  ++ V  Y+F+ E+++V  V+ +  +     + D++A +  G+ RG G   + A  N+   Y    PT
Sbjct:  295 YEIGGFLAGLISETELGAQSVVYELATIA--YMFPLGFAVAASVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVGFPT 441          
The following BLAST results are available for this feature:
BLAST of EY736388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TT12_ARATH1.066e-1931.95Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
YJ2D_SCHPO9.979e-1834.21Uncharacterized transporter C4B3.13 OS=Schizosacch... [more]
YAO6_SCHPO9.340e-1634.46Uncharacterized transporter C11D3.06 OS=Schizosacc... [more]
S47A2_MOUSE2.081e-1533.33Multidrug and toxin extrusion protein 2 OS=Mus mus... [more]
S47A1_RABIT1.761e-1429.73Multidrug and toxin extrusion protein 1 OS=Oryctol... [more]
S47A1_MOUSE4.339e-1330.00Multidrug and toxin extrusion protein 1 OS=Mus mus... [more]
S47A1_RAT7.401e-1330.67Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
S47A1_PONAB1.262e-1227.70Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]
S47A1_HUMAN1.262e-1227.70Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]
S47A1_DANRE2.153e-1227.52Multidrug and toxin extrusion protein 1 OS=Danio r... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-G01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736388 ID=EY736388; Name=EY736388; organism=Citrus sinensis; type=EST; length=859bp
CACGCGTGCGCGGACGCGTGGGTTTGAATTGCTCATTTTAATGTCAGGGC
TTTTGCCTAACCCACAGCTTGAAACTTCAGGCCTATCTGTATGTCTCAAT
ACTATTCAAACCCTGTATGCAATCCCATACGGACTTGGTGCTGCAGTGAG
TACTAGAGTTTCAAATGAACTAGGAGCTGGAAATGTGCAAAAAACCCGTG
TATCTGTGTATGCTGTGGTTTTTATGGCAGTTACTGAGACTATGGTAGTA
AGTGCAACTCTCTTTGCTAGCAGGCGTGTTTTTGGTTACGTTTTCAGCAA
TGAGAAACAAGTTGTGGATTATGTCACAACCATGACTCCTCTGGTTTGTT
TGTCTGTCATCATGGATAGCTTAGCACGAGTCTGTTCAGGTGTTGCAAGA
GGATGTGGGTGGCATAATATAGCTGCTTTTGTGAATCTTGGGGCTTGTTA
TTTGTGTCGAACCCCAACTGCTGCCATCCGGGGGTGCCGGTCAAACTCTA
GAGGAAGGGGGCCACGCACGGCGATGCAGCCGGGTGTTGCGTGGAAACCT
TGCGGGGGGGCATCGTTAAATCTGTTGGGGTTTGGAAAACAGGCCGCTCA
ACCCGCGGACGAAGTACCCGCCGCAGAGCGCCGCGCGAGGAGGGGCCGGG
GGGGGGCCCGCCCCGGAGGCCCGGGCCGGGGGGGGGGGGGGCGGGGGCCG
GGGGGGAGGGCCCGGAGACGCCGCCCACCCCGCGCGCCCCGGCGGCGGGG
GGCGCGGGGCGGGCGCGGAGGGCGCGGGGCGAGCGGCAGCGGCCGGCCGC
GGCCCGCCCCGGACGAACGGGGGGGGGGCGCCGCGGGGCGGCGCCCGCGC
CCCGGCCCC
back to top