EY736386 | Citrus Genome Database

Overview


Name	EY736386
Unique Name	EY736386
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	870

Libraries


Library Name	Type
Sweet orange fruit, development stadium (6 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.494e-46
Identity = 92/140 (65.71%), Postives = 100/140 (71.43%), Query Frame = 1

Query:  355 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKP 774
            TKVGINGFGRIGR+                NDPFID  YM YMFKYDSTHG FKG ++   D  L I GK I VF +RDPA IPWG  G DYVVES+GVFTTI KAS H+KGGAKKV+ISAPSADAPMFV GVN + YKP
Sbjct:    3 TKVGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFKGKVET-KDGKLVIEGKPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKP 141

HSP 2 Score: 23.0978 bits (48), Expect = 6.494e-46
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  783 IVSNGKCTTNGLLLLAR 833
            ++SN  CTTN L  LA+
Sbjct:  145 VISNASCTTNCLAPLAK 161

HSP 3 Score: 23.0978 bits (48), Expect = 6.494e-46
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  156 LAPLAKVIHDNFGIVEGL 173

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 9.000e-46
Identity = 93/148 (62.84%), Postives = 109/148 (73.65%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPT*TLFLMAS 801
            KVGINGFGRIGR+                NDPFID +YMAYMFKYDS HG FKGT++V + S + ++G+ +KVF++RDPA IPWG  G DYVVES+GVFTTI KASAH+KGGAKKVVISAPSADAPM+V GVN   Y P  T+   AS
Sbjct:    3 KVGINGFGRIGRIVLRNALQFQDIEVVAVNDPFIDLEYMAYMFKYDSVHGRFKGTVEVKNGSFV-VDGRPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYVCGVNLDKYNPKDTIISNAS 149

HSP 2 Score: 24.2534 bits (51), Expect = 9.000e-46
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  783 IVSNGKCTTNGLLLLAR 833
            I+SN  CTTN L  LA+
Sbjct:  144 IISNASCTTNCLATLAK 160

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.429e-45
Identity = 87/137 (63.50%), Postives = 104/137 (75.91%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY 768
            KVGINGFGRIGR+                NDPFI+ KY  YM KYDSTHGVFKGTI+V   S L +NGK +K +++RDP+ IPW D G +Y+VES+GVFTT  KASAH+KGGAK+V+ISAPSADAPM+V+GVNEKTY
Sbjct:    4 KVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFKGTIQV-SGSDLIVNGKTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139

HSP 2 Score: 23.8682 bits (50), Expect = 1.429e-45
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K V ++FGI+EG+
Sbjct:  156 LAPLAKVVNDKFGIVEGL 173

HSP 3 Score: 23.0978 bits (48), Expect = 1.429e-45
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  783 IVSNGKCTTNGLLLLAR 833
            ++SN  CTTN L  LA+
Sbjct:  145 VISNASCTTNCLAPLAK 161

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.859e-45
Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY 768
            KVG+NGFGRIGRL                NDPFID  YM YMF+YDSTHG FKGT+K  ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN+  Y
Sbjct:    3 KVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFKGTVKA-ENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNQDKY 138

HSP 2 Score: 25.0238 bits (53), Expect = 1.859e-45
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  774 NMNIVSNGKCTTNGLLLLAR 833
            ++ IVSN  CTTN L  LA+
Sbjct:  141 SLKIVSNASCTTNCLAPLAK 160

HSP 3 Score: 23.0978 bits (48), Expect = 1.859e-45
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  155 LAPLAKVIHDNFGIVEGL 172

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.369e-45
Identity = 92/148 (62.16%), Postives = 107/148 (72.30%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPT*TLFLMAS 801
            KVGINGFGRIGR+                NDPFI+  Y AYM KYDSTHG FKGTI V + + L +NGK +  + +RDPA IPWG  GV+YVVES+GVFTT  KASAH+KGGAKKV+ISAPSADAPMFV+GVNEKTY P+  +   AS
Sbjct:    4 KVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFKGTIDV-NSNGLTVNGKAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDPSVNVLSNAS 150

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4)

HSP 1 Score: 176.022 bits (445), Expect = 5.320e-45
Identity = 86/140 (61.43%), Postives = 101/140 (72.14%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPT 777
            KVG+NGFGRIGRL                NDPFID  YM YMF+YDSTHG F GT+K  ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN + Y  T
Sbjct:    3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKA-ENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYNNT 141

HSP 2 Score: 24.6386 bits (52), Expect = 5.320e-45
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3

Query:  777 MNIVSNGKCTTNGLLLLAR 833
            + IVSN  CTTN L  LA+
Sbjct:  142 LKIVSNASCTTNCLAPLAK 160

HSP 3 Score: 23.0978 bits (48), Expect = 5.320e-45
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  155 LAPLAKVIHDHFGIVEGL 172

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 6.919e-45
Identity = 85/137 (62.04%), Postives = 100/137 (72.99%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY 768
            KVG+NGFGRIGRL                NDPFID  YM YMFKYDSTHG FKGT+K  ++  L ING  I +F +RDP+ I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN + Y
Sbjct:    3 KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKA-ENGKLVINGNAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138

HSP 2 Score: 25.0238 bits (53), Expect = 6.919e-45
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  774 NMNIVSNGKCTTNGLLLLAR 833
            ++ IVSN  CTTN L  LA+
Sbjct:  141 SLKIVSNASCTTNCLAPLAK 160

HSP 3 Score: 23.0978 bits (48), Expect = 6.919e-45
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  155 LAPLAKVIHDNFGIVEGL 172

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 8.999e-45
Identity = 85/137 (62.04%), Postives = 100/137 (72.99%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY 768
            KVG+NGFGRIGRL                NDPFID  YM YMF+YDSTHG F GT+K  ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN + Y
Sbjct:    3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138

HSP 2 Score: 25.0238 bits (53), Expect = 8.999e-45
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  774 NMNIVSNGKCTTNGLLLLAR 833
            ++ IVSN  CTTN L  LA+
Sbjct:  141 SLKIVSNASCTTNCLAPLAK 160

HSP 3 Score: 23.0978 bits (48), Expect = 8.999e-45
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  155 LAPLAKVIHDNFGIVEGL 172

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 8.999e-45
Identity = 85/137 (62.04%), Postives = 100/137 (72.99%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY 768
            KVG+NGFGRIGRL                NDPFID  YM YMF+YDSTHG F GT+K  ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN + Y
Sbjct:    3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138

HSP 2 Score: 25.0238 bits (53), Expect = 8.999e-45
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  774 NMNIVSNGKCTTNGLLLLAR 833
            ++ IVSN  CTTN L  LA+
Sbjct:  141 SLKIVSNASCTTNCLAPLAK 160

HSP 3 Score: 23.0978 bits (48), Expect = 8.999e-45
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  155 LAPLAKVIHDNFGIVEGL 172

[Close]

BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 8.999e-45
Identity = 85/137 (62.04%), Postives = 100/137 (72.99%), Query Frame = 1

Query:  358 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY 768
            KVG+NGFGRIGRL                NDPFID  YM YMF+YDSTHG F GT+K  ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN + Y
Sbjct:    3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138

HSP 2 Score: 25.0238 bits (53), Expect = 8.999e-45
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  774 NMNIVSNGKCTTNGLLLLAR 833
            ++ IVSN  CTTN L  LA+
Sbjct:  141 SLKIVSNASCTTNCLAPLAK 160

HSP 3 Score: 23.0978 bits (48), Expect = 8.999e-45
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2

Query:  815 LAPPCKGVQEEFGILEGV 868
            LAP  K + + FGI+EG+
Sbjct:  155 LAPLAKVIHDHFGIVEGL 172

The following BLAST results are available for this feature:

BLAST of EY736386 vs. ExPASy Swiss-Prot

BLAST of EY736386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 336


Match Name	E-value	Identity	Description
G3P_CRYCU	6.494e-46	65.71	Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto...	[more]
G3P2_AGABI	9.000e-46	62.84	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar...	[more]
G3P_PODAN	1.429e-45	63.50	Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp...	[more]
G3P_CRIGR	1.859e-45	62.77	Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet...	[more]
G3P_AJECA	3.369e-45	62.16	Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello...	[more]
G3P_BOVIN	5.320e-45	61.43	Glyceraldehyde-3-phosphate dehydrogenase OS=Bos ta...	[more]
G3P_COTJA	6.919e-45	62.04	Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn...	[more]
G3P_SPECI	8.999e-45	62.04	Glyceraldehyde-3-phosphate dehydrogenase OS=Spermo...	[more]
G3P_MUSPF	8.999e-45	62.04	Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel...	[more]
G3P_CANFA	8.999e-45	62.04	Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-705-015-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY736386 ID=EY736386; Name=EY736386; organism=Citrus sinensis; type=EST; length=870bp
CACGCGTCCGCGAAAGCCGCAACAACCCAAACCTCGTTAGGGTTTTTGCG
AGAAGAGAGCTCGAAACAGTGTGCTTAAGCTCAACAAATGGCCTTCTCTT
CTCTCCTCAGATCTACGGCCTCCGCTTCTCTCGTCCGCGCCGACCTCACT
TCCTCGCCGTCCGATCGCGTCAAGGGATCATCGACTGCTGCTTTCAGTCG
CAACCTTAACACTTCGAGCATTTTCGGTACTTCAGTTCCAAGTGGTTCAT
CTTCTTCATCACTACAGACATGTGCTGCAAAGAGTATTCAACCCATCAGA
GCCACAGCTACTGAAATTCCTCCAACAATTCAAAAATCACGGAGTGATGG
AAACACAAAGGTCGGAATCAATGGTTTTGGTCGGATTGGAAGGTTGGTTT
TGCGAGTAGCAGCCTTCAGGGATGATGTTGACGTTGTGGCGGTCAATGAT
CCTTTTATTGATGCCAAATACATGGCTTACATGTTTAAGTATGATTCTAC
TCATGGAGTTTTCAAGGGAACCATCAAGGTCGTGGATGACTCCACCTTAG
AAATTAATGGGAAGCTGATTAAAGTTTTCAGCAAAAGGGACCCGGCAGAG
ATCCCTTGGGGTGACTAGGGGGTTGATTATGTTGTTGAATCTTCTGGAGT
CTTTACAACAATTGCGAAGGCTTCAGCTCACATGAAGGGTGGTGCAAAAA
AGGTGGTAATATCAGCTCCATCAGCTGATGCACCAATGTTTGTGGTAGGA
GTGAATGAAAAGACATACAAGCCAACATGAACATTGTTTCTAATGGCAAG
TGTACAACCAATGGCTTGCTCCTCCTTGCAAGGGGGTTCAGGAGGAGTTT
GGAATTCTGGAAGGCGTAAG