EY736383

Overview
NameEY736383
Unique NameEY736383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 55/84 (65.48%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   81 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 55/84 (65.48%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   82 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 55/84 (65.48%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   82 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 55/84 (65.48%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   82 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 54/84 (64.29%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   82 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 54/84 (64.29%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   83 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 54/84 (64.29%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   82 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 54/84 (64.29%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   81 PKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 54/84 (64.29%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   82 PKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY736383 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 54/84 (64.29%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   21 PKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 272
            PKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   82 PKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
The following BLAST results are available for this feature:
BLAST of EY736383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
VATL_PHAAU1.068e-2065.48V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MESCR1.068e-2065.48V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA1.068e-2065.48V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.068e-2065.48V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI3.108e-2064.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH3.108e-2064.29V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL2_ARATH3.108e-2064.29V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL1_ARATH3.108e-2064.29V-type proton ATPase 16 kDa proteolipid subunit c1... [more]
VATL_ORYSJ4.059e-2064.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI4.059e-2064.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-F06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736383 ID=EY736383; Name=EY736383; organism=Citrus sinensis; type=EST; length=670bp
CACGCGTCCGCCGGAATTACCCTAAGGCCAAATCTTATTACCTTTTCGAT
GGCTACGCGCATCTCTCTTCTGGCCTCGCTTGTGGCCTTGCTGGTCTCTC
CGCTGGTATGGCAATTGGGATCGTCGGTGATGCTGGTGTCAGAGCCAATG
CTCAACAGCCGAAGCTTTTCGTTGGGATGATCCTCATTCTGATCTTTGCT
GAAGCGCTGGCACTTTATGGACTTATTGTTGGTATCATTCTTTCTTCTCG
TGCTGGTCAGTCAAGAGCAGACTAGAAGAGGATGCTTTGCTTGGTGGTTA
TTTGGCCTGTTGTGTTCCATTAAGAAGAATTCAGTTCATATTGCCTGTGA
CGGGAGGTGGTAGTCTGCGTTGGGTAGTGTTTTTCTTTTTCGACTTAAAA
GTTATTGTCTGTGGTGTGATTGTTCAACCAGATTGATTCGATTTTTAATG
GTGATGGAGAATGTAGAATTAGGAATTAGCTTCTCCCATTAATAAAATCA
TGCTGTCATTGTNTAGTTTAATGTTAAAATGCTGTATTTTTTGGGATCCA
TTATAGGTTGTTGATACCCTAATAATCGCTTGTAATGTNTTCTGAGACTC
TCTCTACTTGATCTCCAGTTTTGTAAAGCCAAAATTGTGTTTGTGGGTCA
AAAAAAAAAAAAAAAAAAAA
back to top