EY736382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 OS=Arabidopsis thaliana GN=MBP1 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.265e-38 Identity = 79/134 (58.96%), Postives = 98/134 (73.13%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 MVLEATMICIDNSEWMRNGD SPSRL+A+ +A +L+CGA TQSNPENT+GILTM GKGV V T P +DLGKILACMH LD+GGE+N+ IQ+A+ A H +N Q P+K + K + I+ K ++ Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKK 134
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.186e-21 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 M LEAT++C+DNSEWMRNGD +PSR A+ DA +LIC + TQSNPE+ + I++M GK V +L KIL+ EL I G+++ +Q+A+ A H +N P+K + ++ +AK ++ Sbjct: 1 MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPEVLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKETKEELIQLAKRLKK 134
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: RPN10_SCHPO (26S proteasome regulatory subunit rpn10 OS=Schizosaccharomyces pombe GN=rpn10 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.070e-20 Identity = 54/134 (40.30%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 MVLEATMI IDNSEWM NGD P+R A+ D +I NPEN G++T+G V + D GK L+ MH+L + G G GIQ+A+ A H EN Q P+ D K ++ +AK ++ Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKK 134
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 MVLE+TM+C+DNSE+MRNGD P+RL+A+ DA +++C + T+SNPEN +G++T+ V T D G+IL+ +H + G++ GI+VA A H + PV+ + K +V +AK ++ Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITL-ANDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKK 133
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_HUMAN (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 MVLE+TM+C+DNSE+MRNGD P+RL+A+ DA +++C + T+SNPEN +G++T+ V T D G+IL+ +H + G++ GI+VA A H + PV+ + K +V +AK ++ Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITL-ANDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKK 133
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 MVLE+TM+C+DNSE+MRNGD P+RL+A+ DA +++C + T+SNPEN +G++T+ V T D G+IL+ +H + G++ GI+VA A H + PV+ + K +V +AK ++ Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITL-ANDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKK 133
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: RPN10_YEAST (26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae GN=RPN10 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 3.883e-15 Identity = 45/130 (34.62%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAK 567 MVLEAT++ IDNSE+ RNGD +R A+ D+ I A SNPENT+G+++ G V + + GKILA +H+ I G++++ +Q+A+ H +N Q P+ ++ +AK Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAK 130
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_DROME (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Pros54 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 MVLE+TMIC DNS++ RNGD P+RL + D +L+C +SNPEN +G++T+ V V +D G+I + MH + GE+N+ GI++A H + P+ + +V AK ++ Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKK 133
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PSMD4_SCHMA (26S proteasome non-ATPase regulatory subunit 4 OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.356e-12 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 178 MVLEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAKHSRR 579 M EAT+I +DNS++MRNGD P+RL+A+ DA LIC + Q NPENT+G+L++ V D+ KI +H ++ G + I++A A H + P+ D K + +AK ++ Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLA--NTEVLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIGSPILEDEKELTRLAKRLKK 132
BLAST of EY736382 vs. ExPASy Swiss-Prot
Match: PIPSL_HUMAN (Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.356e-12 Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 184 LEATMICIDNSEWMRNGDDSPSRLRARADAGSLICGANTQSNPENTLGILTMGGKGVPV*TNPRTDLGKILACMHELDIGGEMNIGRGIQVARGARGHGENGASVQXXXXXXXXPVKCDXKVMVIMAK 567 L+ +DNSE+M NGD P+RL+A+ DA + +C + T+SNPEN +G++T+ V T D G+IL+ +H + G++ GI VA A H + PV+ + K +V +AK Sbjct: 488 LQMLTTSVDNSEYMGNGDFLPTRLQAQQDAVNTVCHSKTRSNPENNVGLITL-DNDCEVLTTLTPDTGRILSKLHTVQPKGKITFCMGIHVAHLALKHRQGNNHKIRIIAFVGNPVEDNEKNLVKLAK 614 The following BLAST results are available for this feature:
BLAST of EY736382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736382 ID=EY736382; Name=EY736382; organism=Citrus sinensis; type=EST; length=907bpback to top |