EY736377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736377 vs. ExPASy Swiss-Prot
Match: PORB_PSEAE (Porin B OS=Pseudomonas aeruginosa GN=oprB PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.671e-60 Identity = 116/231 (50.22%), Postives = 141/231 (61.04%), Query Frame = 2 Query: 2 AGAARAYDLQTSPYLLGDWGGLRTRLAESGVTLNLGYTGEAAHNFSGG--QDKLTRYTDQWVIGATMDLDKLLGWHGGTFQMTITDRNGRNLG----ADAGIGNNMLIQEVYGRGQTWHMTQFWLNQAFLDNRVQWKIGRLTVGEDFASFSCDFQNLTFCGSQPGNLVGSYWVNWPTSQWATRLKVNTSEQTYVQAGVYQVNPNYVDDGYARRHGLSLDNPNGTTGALTRV 676 A AA A+ S ++LGDWGG RT L E G L Y GEAA N GG DK RYTDQ+ +G MDL+K+LGW FQ T+T+RNG+NL D G+ +QEV+GRGQTW +TQ WL Q + D + K GR GEDF SF CDFQNL FCGSQ GN GS W NWP SQWA R+K N + YVQ G Y+ NP+ ++ G +G + +GT GAL V Sbjct: 29 AHAAEAFS-PNSKWMLGDWGGKRTELLEKGYDFKLEYVGEAAANLDGGYDDDKTGRYTDQFALGVHMDLEKILGWKATEFQFTVTERNGKNLSNDRIGDPRAGHISSVQEVWGRGQTWRLTQLWLKQQYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWAGSIWYNWPVSQWALRVKYNFAPDWYVQVGAYEQNPSNLETG----NGFKMSG-SGTKGALLPV 253 HSP 2 Score: 28.1054 bits (61), Expect = 4.671e-60 Identity = 12/32 (37.50%), Postives = 16/32 (50.00%), Query Frame = 1 Query: 709 LPGSYKFGAWYNTPDGRDLYRTSTHPPPGKPG 804 LPG Y+ G +Y+T D+Y P G G Sbjct: 266 LPGEYRLGYYYSTAKADDVYDDVDGQPQGLTG 297
BLAST of EY736377 vs. ExPASy Swiss-Prot
Match: QUIX_ACIAD (Putative porin quiX OS=Acinetobacter sp. (strain ADP1) GN=quiX PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 9.333e-42 Identity = 85/224 (37.95%), Postives = 118/224 (52.68%), Query Frame = 2 Query: 29 QTSPYLLGDWGGLRTRLAESGVTLNLGYTGEAAHNFSGGQDKLTRYTD--QWVIGATMDLDKLLGWHGGTFQMTITDRNGRNLGAD-------AGIGNNMLIQEVYGRGQTWHMTQFWLNQAFLDNRVQWKIGRLTVGEDFASFSCDFQNLTFCGSQPGNLVGSYWVNWPTSQWATRLKVNTSEQTYVQAGVYQVNPNYV-----DDGYARRHGLSLDNPNGTT 658 Q +LLGDWGG R +L + G +AA N GG + + Q +GA DL K+ GW T + IT R+G +L + +GN QE+YGRG+ W +TQ W+ + F DN VQ+KIGR+ + +DF S C+FQNL CG Q G +GS W NWP W T +K + + + GVY+VNP+ V DG+ L ++N G T Sbjct: 28 QDRQWLLGDWGGERQQLEKQGYKFTASIMSQAATNLDGGYNDSNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRSTTLGNT---QEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGGQLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGF----NLDMNNVKGAT 244 HSP 2 Score: 33.8834 bits (76), Expect = 9.333e-42 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 691 LPAWNGLPGSYKFGAWYNTPDGRDL 765 L +NGLPG YK GA Y+T D D+ Sbjct: 255 LAMFNGLPGEYKVGALYSTADANDV 279 The following BLAST results are available for this feature:
BLAST of EY736377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736377 ID=EY736377; Name=EY736377; organism=Citrus sinensis; type=EST; length=875bpback to top |