EY736376

Overview
NameEY736376
Unique NameEY736376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736376 vs. ExPASy Swiss-Prot
Match: TPS1_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.429e-76
Identity = 148/229 (64.63%), Postives = 171/229 (74.67%), Query Frame = 2
Query:   11 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTD---AIKVPGERR-----------QALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 655
            +TSL+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL EIVHSK M T IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP+    A    G+RR              K +S  +S  +   +QR  Q+  K   NH+  N R+PS +K S+NVLDL  ENYFSCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct:  713 DTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDRRPPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISWNVLDLKGENYFSCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941          
BLAST of EY736376 vs. ExPASy Swiss-Prot
Match: TPS4_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.368e-47
Identity = 106/209 (50.72%), Postives = 125/209 (59.81%), Query Frame = 2
Query:   11 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKL 637
            E SLVWNY+ AD EFGR QARDMLQHLW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FLGKDEDVY FFEPEL                      ++A  ++S GS                              S  K S  ++DL  ENYFS A+G+  T AR+ L SSD+VV  + KL
Sbjct:  631 EASLVWNYENADAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLGKDEDVYTFFEPEL---------------------TKKAKSLSSSGSD-----------------------------SPKKVSSTIVDLKGENYFSVAIGQTHTKARYFLDSSDDVVKLIGKL 789          
BLAST of EY736376 vs. ExPASy Swiss-Prot
Match: TPS3_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.710e-44
Identity = 105/215 (48.84%), Postives = 127/215 (59.07%), Query Frame = 2
Query:   11 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 655
            +TSLVWNY+YADVEFGR QARD+LQ+LW GPISNAS EVV+G  SVEV A+GVTK   I  IL EIVH K M T IDYV C G+FL KDED+Y FFE E+                K+  E R      S+ SS                   NH+          K S NVLDL +ENYFS A+G+ RT AR+++ SS  VV+ L KLA A+++
Sbjct:  551 KTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASAEVVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKAMTTPIDYVFCSGYFLEKDEDIYTFFESEILSP-------------KLSHETR------SKSSSS------------------NHSL-------EKKVSLNVLDLKQENYFSTAIGQARTKARYVVDSSHNVVNLLHKLAVANTT 721          
BLAST of EY736376 vs. ExPASy Swiss-Prot
Match: TPS2_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.034e-36
Identity = 72/100 (72.00%), Postives = 84/100 (84.00%), Query Frame = 2
Query:   11 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPEL 310
            ETSLVWNY+YADVEFGR QARD+LQ+LW GPISNASV+VV+G+ SVEV A+G TKGAAI RIL EIVH K M T ID+V C G+FL KDED+Y FFE ++
Sbjct:  627 ETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFESKI 726          
BLAST of EY736376 vs. ExPASy Swiss-Prot
Match: TPS5_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 2
Query:   11 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGI 331
            ET+LVWNY++AD +FG  QA+++++HL    ++N  V V  G + VEV+  GV KG   +R+L  +    K+   +D++LC+G     DED++         DGP +
Sbjct:  705 ETALVWNYQFADPDFGSCQAKELMEHL-ESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKL---LDFILCVGDD-RSDEDMFEVIMS--AKDGPAL 804          
The following BLAST results are available for this feature:
BLAST of EY736376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TPS1_ARATH3.429e-7664.63Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS4_ARATH4.368e-4750.72Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS3_ARATH7.710e-4448.84Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS2_ARATH2.034e-3672.00Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS5_ARATH1.016e-1136.45Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-E07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736376 ID=EY736376; Name=EY736376; organism=Citrus sinensis; type=EST; length=831bp
CACGCGTCCGGAAACATCCCTAGTTTGGAATTACAAATATGCAGATGTTG
AATTTGGAAGAATTCAGGCAAGAGATATGTTGCAGCATCTCTGGACAGGC
CCAATCTCTAATGCATCTGTTGAAGTTGTTCAAGGAAGCAAGTCTGTAGA
GGTGCGAGCAGTTGGTGTTACGAAGGGTGCAGCAATTGATCGTATTTTGG
CAGAGATAGTTCATAGTAAGAAGATGAAAACAGCAATCGACTATGTGCTG
TGTATTGGACATTTTCTGGGGAAGGATGAAGATGTGTATGCGTTTTTTGA
GCCAGAACTCCCTGATGATGGCCCGGGCATTCCAAGAACCAGACCAACAG
ATGCAATAAAGGTACCAGGGGAGCGAAGACAAGCATTGAAGGTAGCAAGT
AGAGGCAGCTCAAAGATATCTCAAGGTAAGACGCAGCGACCTGCCCAAGC
TCCCGAGAAAAAAACCCCGAATCACAACTGTACTAATGTACGGCAGCCAT
CATCGGATAAGACGTCCTACAATGTGCTTGATCTCAATAAAGAGAACTAC
TTCTCCTGTGCTGTGGGGCGACCTCGTACAAATGCCCGGTTTCTACTTCA
GTCATCGGATGAGGTCGTCTCATTTCTAAAGAAGCTAGCTGACGCATCGT
CGTCACATGAAGCACACAATGGTCCAACTTAAGAAACGTTTTCAGCTTGC
ATGCTTGCGACGTTGCATCTGATTCGTAGGCGCAAGAACCAGCCCCAGAA
TTGAGGTACAGAGAGAGATGACAGATGAGTCCCCTGCTTACTGGGACATG
AATCTACACATGTTTCGTAAAGATAGGATAT
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