EY736370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.267e-46 Identity = 70/106 (66.04%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 + LKK+ETLSYLPPLS EAL KEI+YLIR+ WIPCLEFE E +VYREHH SP YYDGRYWT WKLPM+GCTD+ V+KEVG+ K P AF+ I D+ V+C Sbjct: 64 IGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169 HSP 2 Score: 59.3066 bits (142), Expect = 2.267e-46 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 66 NRASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 NR + A++ AP T L S+ AFP T NND +S+ +NG RVQ MKVW P GL+K Sbjct: 13 NRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKK 68
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.017e-46 Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD 519 L LKKFETLSYLPPLS E L KE++YL+R IPCLEFE E +VYREH++SP YYDGRYWT WKLPM+GC D++ VLKE+ + K P AF+ I D+ Sbjct: 66 LGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDN 165 HSP 2 Score: 70.0922 bits (170), Expect = 5.017e-46 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 66 NRASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 +RAS A +++VAP T L S+SAFP T TNND+TSIA+NG RVQ M+VW P GL+K Sbjct: 15 SRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKK 70
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.665e-44 Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 L LKKFETLSYLPPLS E+L KE++YL+R W+PCLEFE E +VYRE+H+SP YYDGRYWT WKLPM+GCTD++ VLKE+ + K P +F+ I D+ V+C Sbjct: 67 LGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQC 172 HSP 2 Score: 57.3806 bits (137), Expect = 2.665e-44 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 3 Query: 66 NRASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 +R + A A +VAP L SSSAFP T +N D+TSIA+NG RVQ M+VW P GL+K Sbjct: 17 DRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKK 71
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.899e-44 Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 L L+KFETLSYLPPLS E+L K+I YLI WIPCLEFE E +VYRE+++SP YYDGRYW WKLPM+GCTDAT VL E+ + K P + + I D+ V+C Sbjct: 66 LGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQC 171 HSP 2 Score: 68.5514 bits (166), Expect = 5.899e-44 Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 66 NRASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 +RA+ A A +VAP T L S++AFPAT +NND+TS+A+NG RVQ MKVW P GL+K Sbjct: 15 SRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQK 70
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 7.687e-44 Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 L LKKFETLSYLPPLS E+L KE++YL+R W+PCLEFE E +VYRE+H+SP YYDGRYWT WKLPM+GCTD++ VLKE+ + K P +F+ I D+ V+C Sbjct: 67 LGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQC 172 HSP 2 Score: 56.225 bits (134), Expect = 7.687e-44 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 3 Query: 66 NRASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 +R + A A +VAP T L SSSA P T +N D+TSIA+NG RVQ M+VW P GL+K Sbjct: 17 DRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKK 71
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.890e-43 Identity = 66/106 (62.26%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 ++ KK+ETLSYLP LS E LL EI YL++S W+PCLEFE E+ +VYREHH SP YYDGRYWT WKLPM+GCTDAT VL EV + K P A+V I D+ V+C Sbjct: 64 INKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQC 169 HSP 2 Score: 56.6102 bits (135), Expect = 2.890e-43 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 69 RASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 R+++A AN+VAP T L S+++FP + N D+TSIA+NG RVQ M+VW P +K Sbjct: 14 RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKK 68
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.415e-42 Identity = 64/106 (60.38%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 +++KK+ETLSYLP LS E LLKE+ YL+++ W+PCLEFE E +VYRE+HKSP YYDGRYWT WKLPM+GCTDAT VL EV + K P A++ I D+ V+C Sbjct: 65 INMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQC 170 HSP 2 Score: 54.6842 bits (130), Expect = 1.415e-42 Identity = 27/56 (48.21%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 69 RASLAHANVVAPCTVLMSSSAFPATMNTNN-DMTSIANNG*RVQ*MKVWSPSGLEK 233 R+++A A++VAP T L S+++FP T NN D+TS+A+NG RV+ M+VW P ++K Sbjct: 14 RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKK 69
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.079e-42 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 229 KKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDDSVR 528 K +ETLSYLPPL+ E L KE+ YL+R W+PCLEFE E VYRE+H+SP YYDGRYWT WKLPM+GCTDA VL+E+ ++ K P + G I D+VR Sbjct: 69 KFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCY-GRIIGFDNVR 167 HSP 2 Score: 63.929 bits (154), Expect = 4.079e-42 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 66 NRASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSG 224 NRAS A A++VAP T L S+SAFP T T D+TSIA+NG RVQ M+VW P G Sbjct: 15 NRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRG 67
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.533e-41 Identity = 64/106 (60.38%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 +++KK+ETLSYLP LS E LL EI YL+++ W+PCLEFE E +VYRE++KSP YYDGRYWT WKLPM+GCTDAT VL EV + K P A+V I D+ V+C Sbjct: 64 INMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQC 169 HSP 2 Score: 55.0694 bits (131), Expect = 1.533e-41 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 69 RASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 R+++ A++VAP T L SS+ FP T N D+TSIA+NG RV M+VW P ++K Sbjct: 14 RSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKK 68
BLAST of EY736370 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.998e-41 Identity = 65/106 (61.32%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 220 LDLKKFETLSYLPPLSHEALLKEINYLIRSCWIPCLEFEWEKRWVYREHHKSPRYYDGRYWTTWKLPMYGCTDATHVLKEVGDVHKGIPLAFVGSIRCDD--SVRC 531 +++KK+ETLSYLP LS E LL EI YL+++ W+PCLEFE E +VYRE+HKSP YYDGRYWT WKLPM+GCTDAT VL EV + K P A+V I D+ V+C Sbjct: 64 INMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQC 169 HSP 2 Score: 51.9878 bits (123), Expect = 1.998e-41 Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 69 RASLAHANVVAPCTVLMSSSAFPATMNTNNDMTSIANNG*RVQ*MKVWSPSGLEK 233 R + A A++VAP T L S+++FP + N D+TSIA+NG RV M+VW P ++K Sbjct: 14 RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKK 68 The following BLAST results are available for this feature:
BLAST of EY736370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736370 ID=EY736370; Name=EY736370; organism=Citrus sinensis; type=EST; length=865bpback to top |