EY736367

Overview
NameEY736367
Unique NameEY736367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_FRASC (UDP-N-acetylmuramate--L-alanine ligase OS=Frankia sp. (strain CcI3) GN=murC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.337e-26
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQI 599
            KSTT++ML  VL+A G D TA++GA V Q   G+   G G  FVLE+DEY G F GL PS+AV+TN++WEH D+F DE +V++ F  F +++R GG LV+CGD  G  ++L ++
Sbjct:  123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDVFVLESDEYGGAFAGLDPSIAVITNVEWEHPDVFPDEASVRTAFAAFARRVRPGGRLVVCGDHPGVVAVLTEL 235          

HSP 2 Score: 21.1718 bits (43), Expect = 1.337e-26
Identity = 13/52 (25.00%), Postives = 22/52 (42.31%), Query Frame = 1
Query:  673 HDYKIITYGFSSFNDWYAESVCPNVQGGSDY---ILCERRRPLAQISLQIPG 819
            +D  +I YGF +   W A  V      G D     +    + +  ++L +PG
Sbjct:  247 NDVAVIDYGFGAERHWRAVDVV--TTAGDDMTRATVLRAGQEIGALTLTVPG 296          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_FRAAA (UDP-N-acetylmuramate--L-alanine ligase OS=Frankia alni (strain ACN14a) GN=murC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.563e-26
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQI 599
            KSTT++ML  VL+A G D TA++GA V Q   G+   G G  FVLE+DEY G F GL P++AV+TN++WEH DIF DE +V++ F  F +++R GG LV+CGD  G  ++L ++
Sbjct:  123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDLFVLESDEYGGAFAGLEPTIAVITNVEWEHPDIFPDEASVRTAFTAFARRVRPGGRLVVCGDDPGVAAVLAEL 235          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_DESDG (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio desulfuricans (strain G20) GN=murC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.326e-17
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQIKQ 605
            K+TT S+ A +    G D T I+G  +  +   +   G G+  + EADE DG FL LSP V VVTN+D +HVD + D+ A+ + F  F+ ++   G  V+CGD  G R LL QIK+
Sbjct:  116 KTTTTSLTAAIFDEAGTDPTVIIGGRLNAYGSNARL-GEGEFLLAEADESDGSFLCLSPVVNVVTNVDLDHVDFYHDQQAIDTAFINFMNKVPFYGMNVVCGDDAGVRRLLPQIKR 230          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_ROSCS (UDP-N-acetylmuramate--L-alanine ligase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=murC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLL 590
            K+TT +++A +L   G     ++G   P     + +       V+EADEYD  FL L+P +A++TN++WEHVDI+   D  ++ FR F +Q+     L++CGD+ GAR ++
Sbjct:  111 KTTTTALIALMLTRAGIAPGFLIGGETPDLGVNARWGNPAAPLVVEADEYDRTFLALTPDIAIITNVEWEHVDIYPSPDEYEAAFRTFARQVAHPQRLIVCGDNAGARRVV 221          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_MYCS2 (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium smegmatis GN=murC PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.466e-16
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQ 596
            K+TT SML   L+  G D +  VG  + +    +  +G G  FV EADE DG  L  +P+VAVVTN++ +H+D F  E A  ++F  F+++I  GG LV+C D  GA +L D+
Sbjct:  126 KTTTTSMLIVALQHSGFDPSFAVGGELGEAGTNA-HHGSGTTFVAEADESDGSLLEYTPNVAVVTNIEADHLDFFGSEQAYTAVFDSFVERIAPGGALVVCTDDPGAAALADR 237          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_SOLUE (UDP-N-acetylmuramate--L-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=murC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.915e-16
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQIKQDT 611
            K+TT SM A +L   G D T +VG  V      +   G     V+E+DE DG FL L+P +AVVTN+D EH+D + D DA+++ F  F+ ++   G +++C D    + LL +I++ T
Sbjct:  127 KTTTTSMAATILNYAGLDPTVVVGGRVGTMGGSNARVGHSDFLVVESDESDGSFLKLAPIIAVVTNVDREHLDHYPDLDAIRAAFLEFVNKVPFYGAVIVCLDDANVQGLLPEIRRRT 244          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_MYXXD (UDP-N-acetylmuramate--L-alanine ligase OS=Myxococcus xanthus (strain DK 1622) GN=murC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.915e-16
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQIKQ 605
            K+TT SM+A VL A G D TA+VG  V    D +   G  +  V+EADE DG FL L PS+A+VTN+D EH+D + D D ++S F  F  ++   G  V+C D+   ++LL +I++
Sbjct:  126 KTTTTSMVATVLSAAGLDPTAVVGGKVNVL-DSNAKLGKSELMVVEADESDGSFLHLHPSIAIVTNIDPEHMDHYGDLDTLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK 240          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_CORJK (UDP-N-acetylmuramate--L-alanine ligase OS=Corynebacterium jeikeium (strain K411) GN=murC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.267e-16
Identity = 44/114 (38.60%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQI 599
            K++T SM    L+A G D +  +G  + +    +   G G+ FV EADE DG FL  SP +AVVTN++ +H+D F+ E A + +F +F  +I  GG LV+C D  G+ +L +++
Sbjct:  126 KTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNA-HNGTGEVFVAEADESDGSFLSYSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEEL 238          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_DESAD (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=murC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 45/116 (38.79%), Postives = 67/116 (57.76%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQIKQ 605
            K+TT S+LA +      D T I+G  +  F   +   G G+  + EADE DG FL L+P + VVTN+D +H+D +  ++A+   FR+F+  I   G  V+CGD  G + LL  IK+
Sbjct:  116 KTTTTSLLATIFTEAELDPTVIIGGRLNTFGSNARL-GDGQFLIAEADESDGSFLCLAPIITVVTNVDKDHLDFYGGQEAIDESFRKFMNSIPFYGMNVVCGDDPGVQRLLPSIKR 230          
BLAST of EY736367 vs. ExPASy Swiss-Prot
Match: MURC_DESAA (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=murC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  258 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARSLLDQIKQ 605
            K+TT S++A VL A G D T ++G  +      +   G G+  V EADE DG FL +SPS+AVVTN+D EH+D ++D D +K  F +F+ +I   G  V+C DS+  + L+  I +
Sbjct:  116 KTTTTSIVADVLAAGGLDPTVVIGGKLLSIGSNAKL-GHGEFIVAEADESDGSFLKMSPSIAVVTNIDREHMDHYKDMDEIKDAFAQFVDKIPFYGLSVLCLDSEPVQDLIPFINK 230          
The following BLAST results are available for this feature:
BLAST of EY736367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
MURC_FRASC1.337e-2650.00UDP-N-acetylmuramate--L-alanine ligase OS=Frankia ... [more]
MURC_FRAAA1.563e-2650.00UDP-N-acetylmuramate--L-alanine ligase OS=Frankia ... [more]
MURC_DESDG1.326e-1741.38UDP-N-acetylmuramate--L-alanine ligase OS=Desulfov... [more]
MURC_ROSCS8.597e-1736.04UDP-N-acetylmuramate--L-alanine ligase OS=Roseifle... [more]
MURC_MYCS21.466e-1641.59UDP-N-acetylmuramate--L-alanine ligase OS=Mycobact... [more]
MURC_SOLUE1.915e-1638.14UDP-N-acetylmuramate--L-alanine ligase OS=Solibact... [more]
MURC_MYXXD1.915e-1643.10UDP-N-acetylmuramate--L-alanine ligase OS=Myxococc... [more]
MURC_CORJK4.267e-1638.60UDP-N-acetylmuramate--L-alanine ligase OS=Coryneba... [more]
MURC_DESAD5.572e-1638.79UDP-N-acetylmuramate--L-alanine ligase OS=Desulfov... [more]
MURC_DESAA7.278e-1641.38UDP-N-acetylmuramate--L-alanine ligase OS=Desulfat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-D10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736367 ID=EY736367; Name=EY736367; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGGCTTTCTGGAGAAAATTGAAACCTATTTTTTCGGAAACAT
TCCTCTCTCGTTCAAATCTAATCGAACCGCACCTTCTATATTATTATTTA
TGAAGAAGAAAAATAGCGTTTCAGTTTTAACAAATTGCACATTTAAAAGA
AATGAAGAATGCATTGTCGATTTCAAAAATCGAAAGGGGTGGATTCATTT
CGTGGGAATTGGTGGTTCTGGGTTATCTGCACTCGCCAAGCTCGCTCTCA
AACAAGGAAGAGTACAACTGCAAGCATGCTTGCCTATGTTCTGAAGGCAA
TGGGGGATGATCTTACAGCTATAGTTGGAGCACATGTGCCACAGTTTCCA
GACGGAAGCATATTTTATGGAGGTGGCAAAAACTTTGTGCTGGAGGCTGA
TGAATATGATGGTTGCTTCCTGGGATTATCACCCTCTGTAGCTGTAGTGA
CAAATCTGGATTGGGAGCATGTTGATATCTTTGAAGATGAGGATGCTGTT
AAAAGTATTTTTAGGAGATTCCTGAAGCAGATCAGGGTGGGTGGACATCT
TGTCATATGCGGGGACAGTCAAGGTGCACGGTCCTTGCTGGATCAAATAA
AACAAGATACTGGATTGAAGTATTCTGGTGGGAGTGGTTTCTAATCAAAG
TTCAGATCTATGGGGANCAGGGCATGATTACAAAATAATAACTTATGGTT
TTTCAAGTTTTAATGATTGGTACGCTGAATCCGTTTGTCCAAATGTACAG
GGTGGTAGTGATTATATTTTGTGTGAGAGAAGGCGCCCATTGGCTCAAAT
CAGTTTACAAATTCCCGGAATTCCTAAGTGCTGGAAGCGATTCTCGAGAA
TGGCTGGCCCCGTACCAGG
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