EY736353

Overview
NameEY736353
Unique NameEY736353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736353 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.479e-26
Identity = 73/150 (48.67%), Postives = 95/150 (63.33%), Query Frame = 1
Query:  226 EKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVAPRNWESMNLFPQQAGFA------PKNDTPNMIDSSLN-KPAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLS 654
            +K SFSQTCS LSQYLKE GSFGDLSLG++   + NG     R+P  TTM+LFP  + S  D  V+++      +  NLFP+Q  F+      PK D   M  ++ + KP  QTA +TIFY GQVI FNDF A+KA E++ LAS G++ S
Sbjct:   19 KKPSFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQP-TTTMSLFP-CEASNMDSMVQDV------KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS 160          
BLAST of EY736353 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.097e-21
Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  229 KSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVAPRNWESMNLFPQQAGFAPKNDTPNMIDSSLNK-------PAPQTAQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLS 654
            K SFSQTC+ LS+YLKE GSFGDLSLG++   + NG    P     T MNLFP  + SG D S        + +   +FP+Q+ F+  + +    D  + K       P  Q+A +TIFYGG+V+ F+DF A+KA E++ LA+ GS+ S
Sbjct:   15 KPSFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQP-----TMMNLFPC-EASGMDSSA----GQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKS 153          
BLAST of EY736353 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.893e-14
Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  223 PEKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSVRNMVA--PRNWESMNLFPQQAGFAPKNDTPNMID-SSLNKPAPQT--AQMTIFYGGQVIAFNDFPADKANEIMQLASNGSSLS 654
            PEKS+FSQ CSLLS+YLKE GSFG++++G++                 + + L    D  GQ   ++ +     R ++ +  F          D    ID S   K AP++  +Q+TIF+GG+V+ FN+FP DKA EIM++A   + ++
Sbjct:    7 PEKSNFSQRCSLLSRYLKEKGSFGNINMGLARK---------------SDLELAGKFDLKGQQNVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVA 140          
The following BLAST results are available for this feature:
BLAST of EY736353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TI10A_ARATH1.479e-2648.67Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10... [more]
TI10B_ARATH1.097e-2142.28Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10... [more]
TI11B_ARATH2.893e-1434.90Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-C07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736353 ID=EY736353; Name=EY736353; organism=Citrus sinensis; type=EST; length=835bp
CCACGCGTCCGCAAATATGTTATTATTCCTCGTGTTCAATCAACAGATAA
GGCTTTTTCTCCTTACAAATACAGATTGATCATCCAACAGAACAACTTCA
CCAATTCAATTCTGCAGCGTCAGTTGCAGCGCACTAGTTTTATTTTTGCT
CGTGGGTTTCCGCTTCTGAGTTGGTTAAACACAACAAGTATGGCGAGCTC
GTCGGAGATGTCGGTTAACTTGCCGGAGAAATCAAGTTTCTCTCAGACGT
GTAGTCTTTTGAGTCAGTACTTGAAAGAGGGAGGTAGCTTTGGAGATCTT
AGCCTCGGGATATCAAGCAACATTGAAGCTAATGGGGTACCCGAGATCCC
GCGGCGGCCAGCAGCTACAACTATGAATTTGTTTCCAGTAAGTGACAACT
CTGGACAAGATGTTTCAGTTCGAAACATGGTGGCTCCTCGAAACTGGGAA
TCAATGAATTTGTTCCCTCAGCAAGCTGGTTTTGCTCCTAAGAATGATAC
CCCTAACATGATAGATTCAAGTTTAAACAAGCCCGCGCCGCAAACTGCTC
AAATGACTATATTTTATGGCGGACAAGTGATTGCGTTCAATGATTTTCCT
GCTGATAAAGCAAATGAAATCATGCAATTAGCAAGCAACGGGAGCTCACT
GAGCCATGGTACCGCATATCCTCCTATGCAACTGCCGGCCCAGGGTTACA
ACTCTTTTGCTGCTNAGTTACCAAAAGTCCAGTTGAATCACTCCCCCGGT
TTCTCCTGGCCCCCAAAAATCTAACAGAGCCTAGTTGCTCGGTTCCTCCT
CGATCAAATAGCATTCCTAACTTTGGCAACATCTA
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