EY736331

Overview
NameEY736331
Unique NameEY736331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: Y4634_ARATH (Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.060e-72
Identity = 124/177 (70.06%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   20 GCGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCAKAYIHEYKLKLHLKREHPGHMSDEHRENATTNAD-----NEMDEGGDQHAY 535
            GCGKKFLDSSKLKRH+LIHTGER+Y+C +EGCGKAFSLDFNLRSHMKTHSQENYHICPY  C KRYAHEYKL+NH+A++HEKN   E P+Y  P E++ +T K PA V G  SS+RPYACPYEGC KAYIHEYKLKLHLKREHPGH+ +E+ +  T N       NE+D+G DQ  Y
Sbjct:  114 GCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCG-PSSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVY 289          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: ZFP42_HUMAN (Zinc finger protein 42 homolog OS=Homo sapiens GN=ZFP42 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.993e-22
Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASHHEKN 268
            CGK F++SSKLKRHFL+HTGE+ + C  EGCGK FSLDFNLR+H++ H+ E   +CP+  C +R+     L+ HI +H   N
Sbjct:  222 CGKAFVESSKLKRHFLVHTGEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTN 303          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: TYY1_MOUSE (Transcriptional repressor protein YY1 OS=Mus musculus GN=Yy1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.453e-21
Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F++SSKLKRH L+HTGE+ + C  EGCGK FSLDFNLR+H++ H+ +  ++CP+  C K++A    L++HI +H
Sbjct:  330 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 407          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: TYY1_HUMAN (Transcriptional repressor protein YY1 OS=Homo sapiens GN=YY1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.453e-21
Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F++SSKLKRH L+HTGE+ + C  EGCGK FSLDFNLR+H++ H+ +  ++CP+  C K++A    L++HI +H
Sbjct:  330 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 407          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: TYY2_RATRT (Transcription factor YY2 OS=Rattus rattus GN=Yy2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F++SSKLKRH L+HTGE+ Y C  EGCG+ FSLDFNLR+H++ H+ +   +CP+  C K++A    L++HI +H
Sbjct:  292 CGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTH 369          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: TYY2_RAT (Transcription factor YY2 OS=Rattus norvegicus GN=Yy2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F++SSKLKRH L+HTGE+ Y C  EGCG+ FSLDFNLR+H++ H+ +   +CP+  C K++A    L++HI +H
Sbjct:  292 CGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTH 369          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: TYY2_MOUSE (Transcription factor YY2 OS=Mus musculus GN=Yy2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F++SSKLKRH L+HTGE+ Y C  EGCG+ FSLDFNLR+H++ H+ +   +CP+  C K++A    L++HI +H
Sbjct:  294 CGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTH 371          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: PHO_DROME (Polycomb protein PHO OS=Drosophila melanogaster GN=pho PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F++SSKLKRH L+HTGE+ + C  EGCGK FSLDFNLR+H++ H+ +   +CP+  C K++A    L++HI +H
Sbjct:  391 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTH 468          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: ZFP42_MOUSE (Zinc finger protein 42 OS=Mus musculus GN=Zfp42 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.230e-20
Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK F +SSKLKRHFL+HTGE+ Y C  EGCGK FSLDFNLR+H++ H+ E   +CP+  C K +      + HI +H
Sbjct:  204 CGKAFTESSKLKRHFLVHTGEKPYQCTFEGCGKRFSLDFNLRTHIRIHTGERRFVCPFDGCEKSFIQSNNQKIHILTH 281          
BLAST of EY736331 vs. ExPASy Swiss-Prot
Match: TYY2_HUMAN (Transcription factor YY2 OS=Homo sapiens GN=YY2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.230e-20
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 2
Query:   23 CGKKFLDSSKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLQNHIASH 256
            CGK FL+SSKL+RH L+HTGE+ + C  EGCGK FSLDFNLR+H++ H+ +   +CP+  C +++A    L+ HI +H
Sbjct:  288 CGKAFLESSKLRRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTH 365          
The following BLAST results are available for this feature:
BLAST of EY736331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
Y4634_ARATH1.060e-7270.06Uncharacterized zinc finger protein At4g06634 OS=A... [more]
ZFP42_HUMAN4.993e-2252.44Zinc finger protein 42 homolog OS=Homo sapiens GN=... [more]
TYY1_MOUSE1.453e-2152.56Transcriptional repressor protein YY1 OS=Mus muscu... [more]
TYY1_HUMAN1.453e-2152.56Transcriptional repressor protein YY1 OS=Homo sapi... [more]
TYY2_RATRT3.236e-2152.56Transcription factor YY2 OS=Rattus rattus GN=Yy2 P... [more]
TYY2_RAT3.236e-2152.56Transcription factor YY2 OS=Rattus norvegicus GN=Y... [more]
TYY2_MOUSE3.236e-2152.56Transcription factor YY2 OS=Mus musculus GN=Yy2 PE... [more]
PHO_DROME4.227e-2152.56Polycomb protein PHO OS=Drosophila melanogaster GN... [more]
ZFP42_MOUSE1.230e-2053.85Zinc finger protein 42 OS=Mus musculus GN=Zfp42 PE... [more]
TYY2_HUMAN1.230e-2051.28Transcription factor YY2 OS=Homo sapiens GN=YY2 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-H08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736331 ID=EY736331; Name=EY736331; organism=Citrus sinensis; type=EST; length=848bp
CACGCGTCCGCGGACGCGTGGGTGTGGAAAGAAATTTTTGGATAGTTCGA
AGTTGAAAAGACACTTTCTTATTCATACTGGAGAAAGAGATTATGTATGT
CCTCATGAAGGCTGTGGTAAGGCATTCTCTTTGGACTTCAACCTGAGATC
ACACATGAAAACACATTCACAAGAAAATTATCACATCTGCCCATACCCAG
ATTGTGGAAAGAGATATGCTCATGAGTACAAGTTACAGAATCATATTGCA
TCTCACCACGAAAAGAATGCTGCAGTGGAGGTGCCCAGATACGCTACTCC
TCCCGAGAGGATAACAAAAACTCCCAAGCCACCTGCTGGGGTTTATGGTT
CTGCATCATCTGAACGTCCTTATGCATGTCCTTATGAAGGGTGTGCAAAG
GCATATATCCATGAATACAAGCTTAAACTCCATCTGAAGCGGGAGCATCC
CGGCCATATGTCTGATGAACATCGCGAGAATGCCACCACCAATGCTGATA
ATGAGATGGATGAAGGCGGTGACCAACATGCCTATGCCGGAACACGTGTT
ATTGGCAACCGTCGACACCCGACCCGGGCGATACCATCTCCAACATCGCT
CCTGCAAACGTAACGCACCGCCCCGGGTCAGGTCCATCTACTGCCCCCTT
GAATGTATATAGCAACACCCCACTGGAGCCCCTCAACCAAACCTCGTCGG
ACGAAGAACAGAGCCCTCCAACTCGCGGAGCACCCGCGCCCTCCGGCCAG
GCCGCCACGGCCCCGGTGGACCCCCGGACGTGCTGCCCGCTACTAAGCTG
AACCGATTAGGCGCCACTGCGCGTCTCTCGTCCCATCCCCCGGCCCGC
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