EY736325

Overview
NameEY736325
Unique NameEY736325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.174e-86
Identity = 151/186 (81.18%), Postives = 166/186 (89.25%), Query Frame = 3
Query:   99 NGIVA-VDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPY 653
            NG++  V+PKP NG TSK +D +EK+IVK  YDSS P H+LSGNFAPV DETPP KDL V GHLPDCLNGEFVRVGPNPKF+PVAGYHWFDGDGMIHGLRIKDGKA+YVSRFV+TSR KQEE+F G+KFMKIGDLKGLFGLLMVNMQMLRA+LK+LDVSYGHGT NTALVYHH KLL LSEG +PY
Sbjct:    8 NGVILEVEPKPSNGFTSKAVDLLEKIIVKLFYDSSLPHHWLSGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMKIGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLLALSEGDKPY 193          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 9.132e-85
Identity = 152/187 (81.28%), Postives = 165/187 (88.24%), Query Frame = 3
Query:   93 ARNGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPY 653
            A  G+V VDPKP NG +SKVID +EKL+VK++YDSS P HYL+GNF PV  ETPPTKDL V GHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFV TSRLKQEE+FG +KFMKIGDLKGLFGLLMVN+ MLR +LKVLD+SYG GT NTALVYHHGKLL LSE  +PY
Sbjct:   10 AEGGLVKVDPKPTNGFSSKVIDLLEKLLVKFLYDSSLPHHYLTGNFGPVT-ETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYHHGKLLALSEADKPY 195          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.040e-80
Identity = 139/190 (73.16%), Postives = 158/190 (83.16%), Query Frame = 3
Query:   84 DVVARNGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPY 653
            +V  R  IVAV+P+P  G+ S  +D +EK +V   +D S+P HYLSGNFAPV DETPP  DL V GHLP+CLNGEFVRVGPNPKF PVAGYHWFDGDGMIHG+RIKDGKATY SR+V+TSRLKQEE+F G KFMKIGDLKG FGL MV MQ+LRA+LKV+DVSYG GTGNTAL+YHHGKLL LSE  +PY
Sbjct:    8 EVEERRSIVAVNPQPSKGLVSSAVDLIEKAVVYLFHDKSKPCHYLSGNFAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMKIGDLKGFFGLFMVQMQLLRAKLKVIDVSYGVGTGNTALIYHHGKLLALSEADKPY 197          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.509e-79
Identity = 137/185 (74.05%), Postives = 160/185 (86.49%), Query Frame = 3
Query:   99 NGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPY 653
            + I++V P+P  G +SK++D +E+L+VK M+D+S PLHYLSGNFAP+ DETPP KDL V G LP+CLNGEFVRVGPNPKF  VAGYHWFDGDGMIHG+RIKDGKATYVSR+V+TSRLKQEEFFG AKFMKIGDLKG FGLLMVN+Q LR +LK+LD +YG+GT NTALVYHHGKLL L E  +PY
Sbjct:    9 SSIISVHPRPSKGFSSKLLDLLERLVVKLMHDASLPLHYLSGNFAPIRDETPPVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGYHWFDGDGMIHGVRIKDGKATYVSRYVKTSRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLALQEADKPY 193          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  126 PKNGVTSKVIDFVEKLIV-----KWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPYR 656
            P     S  +DF E  ++     K +  +  P H +SGN+APVP+++  +  L V G +PDC++G ++R G NP F PV+G+H FDGDGM+H ++I +G A+Y  RF  T RL QE+  G   F K IG+L G  G+  + +   R    +L+   G G  N  LVY H +LL +SE   PY+
Sbjct:   78 PLQRAASAALDFAETALLRRERSKPLPKTVDPRHQISGNYAPVPEQSVKSS-LSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQ 259          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.166e-29
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 3
Query:  195 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPYRGQ 662
            ++ P   ++GNFAPV +E P  ++L V+G LPD + G +VR G NP   PV G+H+FDGDGM+H ++ + G A+Y  RF +T+R  QE   G   F K IG+L G  G+  + +   RA   ++D ++G G  N  LVY +G+LL +SE   PY+ Q
Sbjct:  116 TADPSVQIAGNFAPV-NEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQ 271          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.107e-29
Identity = 70/175 (40.00%), Postives = 103/175 (58.86%), Query Frame = 3
Query:  153 IDFVEKLIVKWMYDSSQPLH-------YLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPY 653
            +D VE  +V   ++S  PL         ++GNFAPVP+     + L V+G +P C++G +VR G NP + PVAG+H+FDGDGM+H ++  +G A+Y  RF  T RL QE+  G   F K IG+L G  G+  + +   R+  +++D S+G G  N  LVY +  LL +SE   PY
Sbjct:  116 LDMVETALVS--HESKHPLPKTADPKVQIAGNFAPVPEHAAD-QALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPY 287          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.107e-29
Identity = 70/155 (45.16%), Postives = 95/155 (61.29%), Query Frame = 3
Query:  195 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKA-TYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPY 653
            ++ P   ++GNFAPV  E PP  +L V G +P  ++G + R G NP F PVAG+H FDGDGM+H LRI++G A +Y  RF  T+RL+QE   G   F K IG+L G  G+  + +   RA   ++D S G G  N  LVY +G+LL +SE   PY
Sbjct:  116 TADPAVQIAGNFAPV-GERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPY 269          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28
Identity = 73/190 (38.42%), Postives = 111/190 (58.42%), Query Frame = 3
Query:  138 VTSKVIDFVEKLIVKWMYDS------SQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIK-DGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPYRGQGSGKREI 683
            + + ++D +E  IV  M  +      + P   LSGNFAPV +E P    L V+G +P CL G ++R G NP F P+AG+H FDGDGMIH + I  D + +Y  R+ +T+RL QE   G + F K IG+L G  GL  + +   RA + ++D + G G  N  +V+ +G+LL +SE   PY+ +  G+ ++
Sbjct:   69 LAATMLDKIESSIVIPMEQNRPLPKPTDPAVQLSGNFAPV-NECPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDL 257          
BLAST of EY736325 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.016e-28
Identity = 67/174 (38.51%), Postives = 102/174 (58.62%), Query Frame = 3
Query:  153 IDFVEKLIVKWMYDS-----SQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAQLKVLDVSYGHGTGNTALVYHHGKLLPLSEGGQPYR 656
            ID  E+ ++    DS     + P   ++GN++PVP E+   ++L V G +PDC++G ++R G NP F P AG+H FDGDGM+H ++I +G A+Y  RF +T RL QE+  G   F K IG+L G  G+  + +   R    +++   G G  N  LVY + +LL +SE   PY+
Sbjct:   80 IDAAERALISHEQDSPLPKTADPRVQIAGNYSPVP-ESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQ 252          
The following BLAST results are available for this feature:
BLAST of EY736325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CCD1_PEA2.174e-8681.18Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD1_PHAVU9.132e-8581.28Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD_CROSA3.040e-8073.16Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Cr... [more]
CCD1_ARATH1.509e-7974.05Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
NCED5_ARATH2.885e-3039.34Probable 9-cis-epoxycarotenoid dioxygenase NCED5, ... [more]
NCED3_ARATH4.166e-2942.049-cis-epoxycarotenoid dioxygenase NCED3, chloropla... [more]
NCED1_PHAVU7.107e-2940.009-cis-epoxycarotenoid dioxygenase NCED1, chloropla... [more]
NCED1_MAIZE7.107e-2945.169-cis-epoxycarotenoid dioxygenase 1, chloroplastic... [more]
NCED6_ARATH3.527e-2838.429-cis-epoxycarotenoid dioxygenase NCED6, chloropla... [more]
NCED2_ARATH6.016e-2838.519-cis-epoxycarotenoid dioxygenase NCED2, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-G10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736325 ID=EY736325; Name=EY736325; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGACGCGCAGAGAGAGAGTCAGAGAGAGAGAGAGAGAGAG
AGAGTCATGGTGGAGAAAGAAAAGCTGGAGAACGACGTCGTAGCACGAAA
TGGAATAGTGGCGGTGGATCCGAAACCGAAGAATGGAGTGACTTCGAAAG
TGATAGACTTTGTGGAGAAACTGATAGTGAAGTGGATGTACGATTCTTCA
CAGCCTCTTCATTATCTCTCCGGTAACTTCGCTCCAGTTCCTGACGAGAC
TCCTCCTACTAAAGACCTCCACGTCATCGGCCATCTCCCCGATTGCTTGA
ATGGGGAGTTTGTCAGGGTTGGTCCTAATCCCAAGTTTGCCCCTGTGGCC
GGATACCACTGGTTTGATGGAGATGGCATGATTCATGGTCTGCGCATCAA
AGACGGAAAGGCTACATATGTCTCCCGTTTTGTGAGGACTTCACGTCTTA
AACAGGAAGAATTTTTCGGAGGTGCTAAATTTATGAAGATTGGAGACCTT
AAGGGGCTATTTGGATTACTCATGGTTAACATGCAAATGCTTAGAGCACA
GTTGAAAGTACTGGATGTCTCATATGGACATGGGACAGGTAATACAGCTC
TTGTATATCACCATGGGAAACTTCTACCCCTCTCAGAGGGCGGACAACCC
TATCGCGGCCAAGGTTCTGGGAAGAGGGAAATCTGCCACCACTGGGGCTC
CTCGACTCTGGACACGGATCAGACGCTGCCTGGAGCCGGCCCCCCCCGCG
TGTGACCCCACACCCGCCCCCAAAGTGTACCTTTGCGATACGCCAACCGC
CCGCCACTATCTCCTTCCGCCCTTTTTCGCCGCGGATCTCGCGG
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