EY736321

Overview
NameEY736321
Unique NameEY736321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736321 vs. ExPASy Swiss-Prot
Match: MEM11_ARATH (Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.701e-43
Identity = 86/143 (60.14%), Postives = 115/143 (80.42%), Query Frame = 2 
Query:  167 VEGGGTLSEIYQSAKKLLLRARDGVEKLERLESSTSTGGYDSPELSFAVKKDISQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAQEAESLKESLDKYFLRYQRRINEARERAELFGRANGESSHIATLFDEEAPAMQAVR 595
            VEGGG+LS++Y SAK++LL+ARDG+E+LER ESS+     DSP+L+ +VK+DI++++SLC  MD LWRSI  KSQRDLW+RK EQV +EAE L  SL+KY  R QR++ EA+ERA+L GRA+GE +HI  +FDEEA AM +V+
Sbjct:    6 VEGGGSLSDVYSSAKRILLKARDGIERLERFESSSM----DSPDLASSVKRDITEVRSLCSNMDTLWRSIPVKSQRDLWRRKTEQVGEEAEYLNLSLEKYMSRNQRKMLEAKERADLLGRASGEGAHILQIFDEEAQAMSSVK 144
[Close]
BLAST of EY736321 vs. ExPASy Swiss-Prot
Match: MEM12_ARATH (Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.152e-38
Identity = 82/147 (55.78%), Postives = 108/147 (73.47%), Query Frame = 2 
Query:  155 MAMAVEGGGTLSEIYQSAKKLLLRARDGVEKLERLESSTSTGGYDSPELSFAVKKDISQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAQEAESLKESLDKYFLRYQRRINEARERAELFGRANGESSHIATLFDEEAPAMQAVR 595
            MA    GG  LSE+Y SAK++LLRAR+G+EKLER +S       D  +L+ +VK+DI+++QSLC  MD LWRSI  KSQRDLW+RK EQV +EAE L +SL+KY  R QR++ EA+ERA+L GR +GE +HI  +FDEEA  M +V+
Sbjct:    1 MASGTVGG--LSEVYSSAKRILLRARNGIEKLERFDS-------DPTDLASSVKRDITEVQSLCSNMDGLWRSIPVKSQRDLWRRKSEQVGEEAEYLNQSLEKYMWRNQRKMLEAKERADLLGRGSGEGAHILQIFDEEAQGMNSVK 138
The following BLAST results are available for this feature:
BLAST of EY736321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MEM11_ARATH1.701e-4360.14Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 ... [more]
MEM12_ARATH2.152e-3855.78Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-G05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736321 ID=EY736321; Name=EY736321; organism=Citrus sinensis; type=EST; length=984bp
GGGGTGGGGTGGACTTATTAAACACCGGTCCCTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCACGNCGTCCGCAAATACAAAGCAAAAACAAATAA
ACAAACGTCTGTTCATTCAGTCTGAAAAAATCAAAAGAAGTAAAAGGATT
GGCGATGGCGATGGCGGTTGAAGGAGGAGGGACATTATCGGAGATATATC
AAAGTGCGAAGAAGTTGCTGTTGAGAGCGAGAGACGGAGTTGAGAAACTG
GAGAGACTGGAGAGCTCGACGTCGACTGGGGGATACGATTCGCCGGAGCT
CTCCTTCGCCGTCAAGAAAGATATTTCTCAGATCCAGTCACTCTGCGTCG
AGATGGACCGCCTATGGCGCTCCATCGCCGCCAAGTCTCAGCGCGATCTC
TGGAAGAGAAAAGTTGAACAAGTAGCACAAGAGGCTGAATCATTGAAAGA
GAGCCTCGATAAGTACTTTTTAAGATATCAGAGACGGATCAATGAAGCTA
GAGAGAGGGCGGAATTGTTTGGAAGAGCTAATGGAGAGTCGTCTCATATC
GCGACACTGTTCGACGAGGAGGCGCCAGCAATGCAGGCAGTGCGCTATCC
CTCTACGGATGTGGCAGGAATCTTTTGGCAGTGGGGACGGCCCCGGCTGT
GCCGCAGCTCGCGACCCGGGGGGCGCCCTCAACCAACGGCCCACACGAAC
CCCCTCTAGTTGCGGCCGCAGAGCGGGGTTCTCCCCAACTCCATCCCTCG
GAGGACCCACCAAAACAGCAACAACCACCGCTCCAGAGGCGGGATCGAGG
AAATCCGTTTCTCGCGCTTCGTTGCATTCACACGGACGCAGAGACTCCAC
GGGGACGGGGCGGCCGACGAGACCGCGGCGCAGGGGAGGGGCGCCCGGCG
CTTGTAGCGGCCGGCGGCGGGCGGGGAGGGGCTCGTCCCGGTCATGCGGG
CGGGCACGGCGTCGAGTGGTTGGTTGAGTACTGG
back to top