EY736314

Overview
NameEY736314
Unique NameEY736314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736314 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20
Identity = 75/208 (36.06%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  216 EKRGPGNVNLLASPASMGSVCQKS-SVIKERNYMGLXXXXXXXXXXXXXXXXXXXXXXLNLKATELRLGLPGSQSPERGSELCLLGPAQLDEKPLFPLHPTSDS-HYPSQKNVVSGNKRGFSDAMDGFLEGK--YLSSSELLSPRAAPNLGLKSGSIQEN------------PGPPTAKGQEMAHQKPIEERLLLKVRRNKRSGLATT 791
            E+    NV++ +S  +   + + +   +KE NY+GL                      ++LKATEL LGLPGSQSP R +EL LL PA+LDEKP FPL P+ D     SQKN  SGNKRGFSD MD F E K    +    + P AA    +    + +N              PP AK Q +             VR  +++ LATT
Sbjct:    4 EEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKAT-ISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWP---------PVRSYRKNTLATT 201          
BLAST of EY736314 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 53/105 (50.48%), Postives = 59/105 (56.19%), Query Frame = 3
Query:  285 SSVIKERNYMGLXXXXXXXXXXXXXXXXXXXXXXLNLKATELRLGLPGSQSPERGSELCLLGPAQLDEKPLFPLHPTSD--SHYPSQKNVVSGNKRGFSDAMDGF 593
            S  +KERNY+GL                      LN KATELRLGLP SQSPER ++  LL P   DEK LFPL P+ D  S     KNVVSGNKRGF+D  D F
Sbjct:   16 SPCLKERNYLGLSDCSSVDSSTIPNVVGKSN---LNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEF 117          
The following BLAST results are available for this feature:
BLAST of EY736314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
IAA9_ARATH1.606e-2036.06Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA8_ARATH4.094e-1650.48Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-F09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736314 ID=EY736314; Name=EY736314; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGAAAACTCTTTTTGAGTAAAATATTTCCTAAAGGATCAAA
TTGCTCTTTATTTCTCTGTCTTTCATTTTAAATTCTGGGTGTTTGTGTTT
AGATAAAATTCTTTGAACGTCCAAGTGTGGTAGATCTTCTTATGTTAAAC
AGGTTGTACGGAATTAAAGTATCAGATTTTAGATTTTGATGTCTCCACCA
CCTGGTGTTGGTGAGGAGAAGAGGGGTCCTGGCAATGTCAATTTACTGGC
TTCTCCAGCCTCCATGGGCAGCGTATGCCAAAAAAGCTCGGTAATAAAAG
AGCGTAACTACATGGGATTATCAGACTCTTCTTCAATGGACAGCTCAGTG
GTCTCCAGTGTCTCCGGTGAGAGTAGCAAGAGCAGTCTGAATCTCAAGGC
TACAGAGCTGAGGCTCGGACTTCCTGGGTCCCAGTCTCCAGAGAGAGGTT
CGGAACTCTGCCTCCTAGGTCCTGCGCAACTGGATGAGAAGCCATTGTTC
CCTTTGCATCCAACAAGTGATAGCCACTACCCATCACAGAAGAATGTTGT
TTCTGGAAATAAAAGGGGGTTCTCTGATGCTATGGATGGGTTCTTAGAGG
GGAAATATCTTTCTAGTTCTGAGCTATTGTCACCCAGGGCTGCTCCAAAC
TTGGGGCTGAAGTCAGGTTCTATTCAAGAGAACCCTGGGCCTCCAACCGC
TAAAGGGCAAGAGATGGCCCACCAGAAACCAATCGAGGAAAGGCTTCTGT
TAAAAGTGAGACGTAACAAACGTAGTGGTCTCGCAACTACACTCACGAGC
ACCTGTTGCCAGGCAAAGGTGTGGGGTATGCACAAGCTGGACAGTCGGGA
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