EY736311

Overview
NameEY736311
Unique NameEY736311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736311 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.425e-19
Identity = 44/141 (31.21%), Postives = 61/141 (43.26%), Query Frame = 1
Query:   37 DGKVERLRGTDI---VPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQK---------------------LPLLVYFHGGGFCSETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVAS 387
            DG  ER  G  +   VP +  P   V S D +      L  R+Y        ++                      P++++FHGG F   +A S  Y +     V  +  + VSV+YRRAPEH  P AY+D W A+KWV S
Sbjct:   38 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS 178          

HSP 2 Score: 44.2838 bits (103), Expect = 9.425e-19
Identity = 23/49 (46.94%), Postives = 30/49 (61.22%), Query Frame = 2
Query:  446 LFYSGDSAGANIAHHMAIRNGGEIIDGFNVVGIVLIHPYFWGVEPVGSE 592
            +F SGDS+G NIAHH+A+R   E   G  V G +L++  F G E   SE
Sbjct:  192 VFLSGDSSGGNIAHHVAVRAADE---GVKVCGNILLNAMFGGTERTESE 237          
BLAST of EY736311 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.069e-15
Identity = 52/154 (33.77%), Postives = 72/154 (46.75%), Query Frame = 1
Query:   73 VPPSLDPKTNVDSKDVVYSPENNLSARLYLP------------KNTNQNQKLPLLVYFHGGGFCSETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGNGPEDWLNRYADFERSVLLWGQRWC*YCSSHGN 498
            VP + +P   V S DV+   + NL +R+Y P            +N    + +P++V+FHGG F   +A S  Y      LV     + VSV+YRRAPE+  P AY+D W  +KWV S         WL    D +  + L G       SS GN
Sbjct:   53 VPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGD------SSGGN 193          
BLAST of EY736311 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.019e-15
Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 1
Query:   85 LDPKTNVDSKDVVYSPENNLS----ARLYLPKNTNQNQKLPLLVYFHGGGFCSETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGNGPEDWLNRYADFERSVLLWGQRWC*YCSSHGN 498
            +D  TN+ ++  +Y P + L       L L K  +  + +P+L++FHGG F   +A S  Y  +   LV+   ++ VSVDYRR+PEH  P AY+D W+A+ WV S V       WL    D    V L G       SS GN
Sbjct:   69 VDSTTNLLTR--IYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGD------SSGGN 195          
BLAST of EY736311 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 52/156 (33.33%), Postives = 71/156 (45.51%), Query Frame = 1
Query:   73 VPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQK--------------LPLLVYFHGGGFCSETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGNGPEDWLNRYADFERSVLLWGQRWC*YCSSHGN 498
            V  + +P   V S DV+     NL +R+Y P   +Q Q               +P++++FHGG F   +A S  Y      LV     + VSV+YRRAPE+P P AY+D W A+ WV S         WL    D +  + L G       SS GN
Sbjct:   53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGD------SSGGN 195          
BLAST of EY736311 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.559e-11
Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 1
Query:   91 PKTNVDSKDVVYSPENNLSARLYLPKNTNQNQKLPLLVYFHGGGFCSETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKW 378
            P T+ ++  V  +  NN+  R+Y+PK  ++  +  L  Y HGGG+C  +A    Y           +++ VS +YR APE+  PI +ED +DA+KW
Sbjct:   71 PPTSDENVTVTETTFNNVPVRVYVPKRKSKTLRRGLF-YIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKW 165          

HSP 2 Score: 21.1718 bits (43), Expect = 8.559e-11
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  455 SGDSAGANIAHHMA 496
            SGDSAG N+A  +A
Sbjct:  185 SGDSAGGNLAAAVA 198          
The following BLAST results are available for this feature:
BLAST of EY736311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GID1_ORYSJ9.425e-1931.21Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
GI1L3_ARATH2.069e-1533.77Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L2_ARATH6.019e-1535.92Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GI1L1_ARATH2.287e-1433.33Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
AAAD_RABIT8.559e-1134.38Arylacetamide deacetylase OS=Oryctolagus cuniculus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-F06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736311 ID=EY736311; Name=EY736311; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGCTCTCCTTTGATAAAAGTACACAAAGACGGCAAAGTAGA
AAGGCTTAGGGGCACCGATATCGTTCCCCCATCACTTGATCCCAAAACAA
ACGTTGATTCCAAAGACGTTGTGTATTCTCCCGAAAATAATTTATCTGCT
CGGCTTTACCTCCCGAAAAACACAAATCAAAACCAAAAACTTCCCCTTCT
TGTTTATTTTCACGGTGGAGGTTTTTGCTCCGAGACTGCTTTTTCACCAA
CTTACCATAATTACCTCAACGACTTGGTCTCTGAAGCTAACATCATCGCA
GTCTCGGTCGACTACCGAAGAGCCCCAGAGCATCCCCTTCCTATCGCTTA
TGAAGATTCATGGGACGCAGTCAAATGGGTTGCTTCCCATGTTGACGGAA
ATGGCCCCGAAGATTGGCTCAACCGTTATGCTGATTTTGAGCGATCTGTT
TTACTCTGGGGACAGCGCTGGTGCTAATATTGCTCATCACATGGCAATAA
GAAACGGTGGAGAAATTATCGACGGCTTTAATGTTGTTGGTATTGTCTTG
ATTCATCCATACTTTTGGGGTGTTGAACCTGTTGGTTCCGAGCCTACTGA
TGTTAAAATAAGAGCTGGAACGGAGAGATTTTGGCGATTTACTTGTCCAA
GCACAAGCGGGCTCCATGATTCGCTGGGTTAATCCCCGTTGCCAACTGGT
TGAGGCCTCGCAAGCCTAGGGTTGGCCAAGGATGCTGGCTCGTGTGGGGC
CAGCGAAGGGCGGCTGAGGCGCGGGGAGGGGGAGGGCTCATTCATAGGAT
GCATCACCCGCGGGGGAGGAAATCTAGAATGGGGGGTCGAAGGTGGGAGC
GGTGGGG
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