EY736298

Overview
NameEY736298
Unique NameEY736298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 2
Query:   29 LAQYGDLVSLDRES---VLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRIT---LNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSPFDELEPEL 469
            L  Y +   LD E    +  + E ID+ FS  ++EEI++ L+ + ++    +  K  E L + SP SLK+T + I EG   SL +  + EYR++   +NG      +DF EG+RA L+DKD +PKW P +LA VS+  VD  FS  DE + +L
Sbjct:  240 LDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGSVEEIVENLKKDGSA----FALKQAETLAKMSPTSLKLTFRQIEEGARMSLQEVFMMEYRLSQACMNG------HDFYEGVRAVLIDKDQSPKWKPSTLAGVSEQFVDKCFSSLDERDLKL 382          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 2
Query:   83 IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYF 439
            ++ I+ CFS +T+E+II+ L  +  S + +   K + K+   SP SLK+TL+ + EG  ++L + L+ EYRIT   +     +DF EG+RA L+DKD  PKW P +L DV+ + ++ YF
Sbjct:  264 MDKINSCFSANTVEQIIENLRQDG-SPFAIEQMKVINKM---SPTSLKITLRQLMEGSSKTLQEVLIMEYRITQACME---GHDFHEGVRAVLIDKDQTPKWKPANLKDVTDEDLNSYF 375          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_DICDI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium discoideum GN=hibch PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 2
Query:    8 SAIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREG-RFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSP 445
            S  I + L +Y D            +  I++ F  ++++EI + LE    S    W ++ ++ LK  SP SL V  + +++G +  SL +CL  E+RI+ + + K    DF EG+RA LVDKD  PKW PPS+  + + +V+ YF P
Sbjct:  232 SQTINSILTKYHDKSKSTSNEYNDNLGDIERIFGKNSVKEIFEQLELLENSE---WAKQTLKTLKSVSPSSLMVVFEQMKQGAKLPSLAKCLEMEFRISQHFLEKP---DFFEGVRALLVDKDKNPKWLPPSIDQIDQTLVNSYFKP 372          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 48/133 (36.09%), Postives = 79/133 (59.40%), Query Frame = 2
Query:   50 VSLDRESVLRK-IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFSP 445
            +  ++E VL + +E I+  FS +++EEI+  L+ + +     +  K +E + + SP SLK+TL+ +REG   SL      EYR++   +     +DF EG+RA L+DKD +P+W P +L +VS + VD  F P
Sbjct:  252 IDQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGSP----FATKQLEAINKMSPTSLKLTLRQLREGATMSLQDVFTMEYRLSQACMR---GHDFYEGVRAVLIDKDQSPRWKPAALEEVSDEFVDNCFKP 377          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 42/119 (35.29%), Postives = 73/119 (61.34%), Query Frame = 2
Query:   83 IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYF 439
            ++ I+ CFS +T+E+I++ L  + +     +  + ++ + + SP SLK+TL+ + EG  ++L + L  EYR+T   +     +DF EG+RA L+DKD  PKW P  L DV+ + ++ YF
Sbjct:  264 MDKINSCFSANTVEQILENLRQDGSP----FAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLTQACME---GHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYF 375          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 2
Query:   59 DRESVLRK-IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRIT---LNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFS 442
            D+  VL + ++ I+  FS +T+EEI++ L+ + +S    +  K ++ L   SP SLK+T + ++EG   SL + L  EYR++   +NG      +DF EG+RA L+DKD   KW P SL +V++D +D  F+
Sbjct:  255 DKPFVLAENMDKINSLFSGNTVEEIMENLKCDGSS----FAMKQLQTLSTMSPTSLKITFRQLKEGASMSLQEVLTMEYRLSQACMNG------HDFYEGVRAVLIDKDQKAKWKPESLEEVTEDYIDSCFT 376          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 48/134 (35.82%), Postives = 84/134 (62.69%), Query Frame = 2
Query:   50 VSLDRESVLRK-IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLK---EASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYF 439
            +  D+  +L + ++ I+ CFS +T+EEII+ L+ + +S        A+E+LK   + SP SLK+TL+ + EG  ++L + L  EYR++   +     +DF EG+RA L+DKD +PKW P  L +V+++ ++ +F
Sbjct:  253 IDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSF-------ALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMR---GHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHF 376          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15
Identity = 44/128 (34.38%), Postives = 82/128 (64.06%), Query Frame = 2
Query:   59 DRESVLRK-IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYF 439
            D+  +L + ++ I+  FS +T+E+I+D L+ + +S    +  + ++ +K+ SP SLK+TL+ + EG  ++L + L+ EYR++   +     +DF EG+RA L+DKD +PKW P  L +V+ + ++ YF
Sbjct:  256 DKPFILEEHMDKINSWFSANTVEQIVDNLQQDGSS----FALEQLKVIKKMSPTSLKITLRQLMEGSSKTLPEVLIMEYRLSQACMK---GHDFHEGVRAVLIDKDQSPKWKPADLKEVTDEDLNDYF 376          
BLAST of EY736298 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 2
Query:   59 DRESVLRK-IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSIREGRFQSLDQCLVREYRITLNGISKKVSNDFCEGIRARLVDKDFAPKWDPPSLADVSKDMVDCYFS 442
            D+  VL + ++ I+  FS  ++E II+ L  + +S    +  K ++ L   SP SLK+T + ++EG   SL + L  EYR++   +      DF EG+RA L+DK+   KW+P  L +V+ D +D YF+
Sbjct:  255 DKPFVLAEHLDKINSLFSASSVEAIIENLRCDGSS----FALKQLQTLSTMSPTSLKITFRQLKEGSSMSLQEVLTMEYRLSQACMK---GYDFYEGVRAVLIDKNQNAKWNPELLEEVTDDYIDSYFT 376          
The following BLAST results are available for this feature:
BLAST of EY736298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
HIBCH_DANRE1.963e-1837.913-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE1.407e-1639.503-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_DICDI3.134e-1634.013-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK6.981e-1636.093-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT1.191e-1535.293-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENLA1.555e-1537.123-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_HUMAN1.555e-1535.823-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_BOVIN2.653e-1534.383-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR1.901e-1334.883-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736298 ID=EY736298; Name=EY736298; organism=Citrus sinensis; type=EST; length=721bp
CCACGCGTCCGCAATCATAGAGACTTCTCTTGCTCAATATGGTGACCTTG
TCTCTCTAGATAGGGAGAGTGTTCTTCGCAAGATTGAGACAATTGATAAA
TGTTTCAGTCATGACACAATCGAGGAAATTATTGATGCTTTGGAAAATGA
GGCAGCTTCCTCTTATGATGTATGGTGCAGAAAAGCTGTTGAAAAACTGA
AAGAGGCATCTCCATTGAGCTTGAAAGTTACTTTACAATCAATACGAGAA
GGTAGATTCCAATCTCTTGATCAGTGTTTGGTACGCGAATATCGCATAAC
CCTCAATGGGATCTCCAAAAAGGTCTCAAATGACTTCTGTGAGGGCATTC
GGGCTCGGTTAGTGGATAAAGATTTTGCACCTAAGTGGGATCCTCCAAGT
TTAGCAGATGTGAGCAAAGATATGGTCGACTGCTATTTCTCCCCATTTGA
TGAGTTGGAGCCTGAACTGCAGCTGCCCACGGCGTTGCGAGAACCTTACA
TCTGAGATAGATTTATACATTTTGAAGCAAGAATGCTGAAATTTTGTCGT
TGTCATCTGTTCTAATCAACCTGTGCCATTTTTCATTTTTTGGTTATACA
TATTGAAAATTTTGGAATATAATTTGTTGTAATTGCATATTACCTTANGC
CTTGGATGTTCGATAAGATGTTCTCTTGATTATTTTATACAATAATTTTA
AGCAAAAAAAAAAAAAAAAAA
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