EY736294

Overview
NameEY736294
Unique NameEY736294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.458e-106
Identity = 190/245 (77.55%), Postives = 201/245 (82.04%), Query Frame = 1
Query:   43 MSSCINPSTLATSVNGFKCLPLPTNRAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELPLLWKVP 777
            MSSCINPSTL TSVN FKCLPL TN+AAIRIMAK KPVQCL+SAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKV   IKDV EPLDQLELIDNLQRLGLA+ FETEIRNIL+          WRKENLYATSLEFRLLRQHGYPVSQ+VFNGFKDD+GGFIC+DFKGI+SLHEA                FT  HLKEVMISK+ + DV V EQ KRALELPL WKVP
Sbjct:    1 MSSCINPSTLVTSVNAFKCLPLATNKAAIRIMAKYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKNMEEDVFVAEQAKRALELPLHWKVP 245          

HSP 2 Score: 30.0314 bits (66), Expect = 2.458e-106
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  789 RWVLHRYEKRRDKNH 833
            RW +H YE+R DKNH
Sbjct:  250 RWFIHIYERREDKNH 264          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.806e-43
Identity = 97/215 (45.12%), Postives = 133/215 (61.86%), Query Frame = 1
Query:  148 KPVQCLVSAKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILH-XXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELPLLWKVP 777
            +PVQC+V+ K      + RRSANYQPSIW+HD+++SL   Y  ET  R+   LK +V   +  V  PL+QLELI+ LQRLGL+YHFE EI+ IL            W+ ENLYAT+L+FRLLRQHGY VSQ+VFN FKD++G F   +C D KG++SL+EA                F+  HL+E  + ++K+ ++        +LE PL W++P
Sbjct:   39 RPVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEE-YVKQNKEKNLATL--VNHSLEFPLHWRMP 250          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.242e-35
Identity = 87/215 (40.47%), Postives = 121/215 (56.28%), Query Frame = 1
Query:  151 PVQCLV--SAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFIC----NDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKE--VMISKSKQGDVXVTEQTKRALELPLLWK 771
            P+QC +  S   D  T+ RRSANY P IW  DF+QSL   Y  E Y  R+ +LK +V   +  +   L QLELID LQRLG++YHFE EI +IL             K +LYAT+LEFRLLR++GY + Q++FN FKD+ G F      +D KG+++L+EA                FT  +LK   +MI ++   +  +    + ALE+PL W+
Sbjct:   53 PIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLKRYVMMIDQNIILNDNMAILVRHALEMPLHWR 267          

HSP 2 Score: 23.0978 bits (48), Expect = 3.242e-35
Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  789 RWVLHRYEKRRDKN 830
            +W +  YEK +DKN
Sbjct:  274 KWFIEEYEKTQDKN 287          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.290e-30
Identity = 94/269 (34.94%), Postives = 136/269 (50.56%), Query Frame = 1
Query:   13 KLAYTTSVYPMSSCINPSTLATSVNGFKCLPLPTNRAAIRIMAKNKP-----VQCLV----SAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGG----FICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLK--EVMISKSKQGDVXVTEQTKRALELPLLWKV 774
            + A ++S+   SS  N  T  TS+      P P  ++   + ++++      +QC V    S+   N + DRRSANY P IW  DF+QSL   Y  E+Y  R  +L+  V   +  V   L QLELID +QRLG++Y FE EI +IL               +LYAT+L+FRLLRQ+G+ V Q++FN FK+ K G     I ND  G + L+EA                FT   LK  ++M S +      ++     ALE+PL W++
Sbjct:    8 QFASSSSLPIWSSIDNRFTPKTSITSIS-KPKPKLKSKSNLKSRSRSSTCYSIQCTVVDNPSSTITNNS-DRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILEEARIFTTKCLKKYKLMSSSNNNNMTLISLLVNHALEMPLQWRI 274          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.366e-29
Identity = 78/229 (34.06%), Postives = 121/229 (52.84%), Query Frame = 1
Query:  109 PTNRAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNIL---HXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKG----GFICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELPLLWKV 774
            P+    +   A    ++   S+K       RRS NYQP++WD +++QSLN+ YT+E +  R  EL  +V   +K+  EP+ QLELI +L+ LGL+  F+ EI+ IL   +            K +LY T+L FRLLRQHG+ +SQDVFN FK++KG      +  D KG++ L+EA                F    L++ +     + D  +    + +L+LPL W++
Sbjct:   25 PSKALLVPCTAPTARLRASCSSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDENLLLWIRHSLDLPLHWRI 253          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.641e-28
Identity = 78/199 (39.20%), Postives = 113/199 (56.78%), Query Frame = 1
Query:  190 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEP-LDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKGIISLHEA-XXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQ--GDVXVTEQTKRALELPLLWKV 774
            TV RRSANYQPS WDH  L S+ + +  +   R  + LK KV   + D  +  LDQLE ID+LQ+LG++YHFE EI NIL            ++ +L+AT+LEFRL RQHG+ VS+DVF+ F ++ G F  +D  G+ISL+EA                 F    L++ + + S +  G   + E   +AL++P  W++
Sbjct:   43 TVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRTNI-QESDLHATALEFRLFRQHGFNVSEDVFDVFMENCGKFDRDDIYGLISLYEASYLSTKLDKNLQIFIRPFATQQLRDFVDTHSNEDFGSCDMVEIVVQALDMPYYWQM 240          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.220e-28
Identity = 80/226 (35.40%), Postives = 116/226 (51.33%), Query Frame = 1
Query:  115 NRAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEP-LDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWR---KENLYATSLEFRLLRQHGYPVSQDVFNGFKD--DKGGFICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELPLLWKV 774
            +R   + M K  P   LV        + RRS NYQPS W+H +L S+ + Y  ET     + LK KV + + D  +  L+QLELID+LQ+LG++YHFE EI + L           W+   +E+L+ATSLEFRLLRQHG+ VS+++F+   D  +   F  N+  GIISL+EA                          +      ++ V E+   ALE+P  W++
Sbjct:   26 HRFVCKSMTKTTPDTTLVE-------LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVIIDQIESNTFKTNNINGIISLYEASYLSTKSDTKLHKVIRPFATEQIRKFVDDEDTKNIEVREKAYHALEMPYHWRM 244          

HSP 2 Score: 21.9422 bits (45), Expect = 9.220e-28
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 3
Query:  789 RWVLHRYEKRRDKN 830
            RW +  YEK+ D N
Sbjct:  250 RWYIDAYEKKHDMN 263          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 9.221e-28
Identity = 74/204 (36.27%), Postives = 113/204 (55.39%), Query Frame = 1
Query:  187 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEP--LDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXW---RKENLYATSLEFRLLRQHGYPVSQDVFNGFKD--DKGGFICNDFKGIISLHEA-XXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELPLLWKV 774
            L + RRS NYQPS WDH +L S+ + Y +E        LK KV   +++V     L++LELID+LQ+LG++YHFE EI NIL           W   ++E+L+AT+LEFRLLRQHG+ VS+D+F+   D  +   F  ++   II+L+EA                 F    ++  +  +S+  ++ + E    ALE+P  W++
Sbjct:   43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVIIDKIESNTFKSDNITSIITLYEASYLSTKSDTKLHKVIRPFATEQIRNFVDDESETYNIMLREMAIHALEIPYHWRM 246          

HSP 2 Score: 23.0978 bits (48), Expect = 9.221e-28
Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 3
Query:  789 RWVLHRYEKRRDKNHF 836
            RW +  YEK+ D N F
Sbjct:  252 RWYIDAYEKKHDMNLF 267          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.229e-28
Identity = 79/200 (39.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query:  193 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNIL------HXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNG----FKDDKGGFICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKE-VMISKSKQGDVXVTEQTKRALELP 759
            V RRSANYQPS+W H++L SL + Y  E    R   LK +V   + +    L+QLELID LQRLG++YHFE EI+  L      +           R  +LYAT+LEFRLLRQHG+ ++QDVF+G      DDK      D KGI+SL+EA                +T   L++ V ++K++     +      ALE+P
Sbjct:   24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRNRWGDLYATALEFRLLRQHGFSIAQDVFDGNIGVDLDDK------DIKGILSLYEASYLSTRIDTKLKESIYYTTKRLRKFVEVNKNETKSYTLRRMVIHALEMP 217          

HSP 2 Score: 21.1718 bits (43), Expect = 9.229e-28
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  812 EKKRQEPLLIELAKLE 859
            E+    P+L+ELAKL+
Sbjct:  236 ERHDMNPILLELAKLD 251          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.370e-27
Identity = 72/196 (36.73%), Postives = 109/196 (55.61%), Query Frame = 1
Query:  199 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDK----GGFICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELPLLWKV 774
            RRS +YQPS+WD +++QSLN+ Y ++ +  R  EL  +V   +K   E + QLELID+LQ LGL+Y F+ EI+ IL           +   +LY T+L FR+LRQHG+ VS+DVF+ FK +K       +  D KG++ L+EA                F+   L+E       + D  ++   + +L+LPL W+V
Sbjct:   52 RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQIL--SSIHNEPRYFHNNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLELARRFSTRSLREKFDEGGDEIDEDLSSWIRHSLDLPLHWRV 245          
The following BLAST results are available for this feature:
BLAST of EY736294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RLC1_CITLI2.458e-10677.55(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL1.806e-4345.12Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA3.242e-3540.47(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA2.290e-3034.94(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
BPPS_SALOF7.366e-2934.06(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
MYRS1_ARATH1.641e-2839.20Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]
CINS_ARATH9.220e-2835.401,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH9.221e-2836.27Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
OCIS_ARATH9.229e-2839.50(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
SSS_SALOF2.370e-2736.73(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-D08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736294 ID=EY736294; Name=EY736294; organism=Citrus sinensis; type=EST; length=859bp
CACGCGTCCGGTAAGCTAGCTTACACTACATCTGTATATCCAATGTCTTC
TTGCATTAATCCCTCAACCTTGGCTACCTCTGTAAATGGTTTCAAATGTC
TTCCTCTTCCAACAAATAGAGCAGCCATCAGAATCATGGCAAAAAATAAG
CCAGTCCAATGCCTTGTCAGCGCCAAATATGATAATTTGACAGTTGATAG
GAGATCAGCAAACTACCAACCTTCAATTTGGGACCATGATTTTTTGCAGT
CACTGAATAGCAACTATACGGATGAAACATACAAAAGACGAGCAGAAGAG
CTGAAGGGAAAAGTAATGACAACAATTAAGGATGTAACCGAGCCTCTGGA
TCAGTTGGAGCTGATTGACAACTTGCAAAGACTTGGATTGGCTTATCATT
TTGAGACTGAGATTCGGAACATATTGCACAATAACTACAACAATAATAAA
GATTATAATTGGAGAAAAGAAAATCTGTATGCAACCTCCCTCGAGTTTAG
ACTACTTAGACAACATGGCTATCCTGTTTCTCAAGACGTTTTCAATGGTT
TTAAAGACGACAAGGGGGGCTTCATTTGTAATGATTTCAAGGGAATAATA
AGCTTGCATGAAGCCTCGTATTACAGCTTGGAAGGAGAAAGCTCATGGGA
GGAGGGCTGNNCATTCACCAGGTAACATCTAAAAGAAGTGATGATCAGCA
AGAGCAAGCAAGGGGATGTCTTNGTAACAGAACAAACCAAGCGTGCACTG
GAGCTTCCTCTGCTTTGGAAAGTTCCATGTTAGAGGCAAGGTGGGTCCTA
CACCGTTATGAGAAAAGAAGAGACAAGAACCACTTTTAATTGAGCTCGCT
AAGTTGGAA
back to top