EY736284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: TNPO1_MOUSE (Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 4.867e-62 Identity = 122/240 (50.83%), Postives = 163/240 (67.92%), Query Frame = 3 Query: 39 VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFL 758 ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD+NKRVQEAACS IL L+ AF KYQ +NL I+YDAIGTLAD+VG LN+P Y+ +LMPPLI KW +L + DKDLFPLLEC +S+ AL +GFL Sbjct: 378 ISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFL 610
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: TNPO1_HUMAN (Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 4.867e-62 Identity = 122/240 (50.83%), Postives = 163/240 (67.92%), Query Frame = 3 Query: 39 VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFL 758 ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD+NKRVQEAACS IL L+ AF KYQ +NL I+YDAIGTLAD+VG LN+P Y+ +LMPPLI KW +L + DKDLFPLLEC +S+ AL +GFL Sbjct: 378 ISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFL 610
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: TNPO1_BOVIN (Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 4.867e-62 Identity = 122/240 (50.83%), Postives = 163/240 (67.92%), Query Frame = 3 Query: 39 VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFL 758 ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD+NKRVQEAACS IL L+ AF KYQ +NL I+YDAIGTLAD+VG LN+P Y+ +LMPPLI KW +L + DKDLFPLLEC +S+ AL +GFL Sbjct: 378 ISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFL 610
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: TNPO2_MOUSE (Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 8.301e-62 Identity = 125/237 (52.74%), Postives = 159/237 (67.09%), Query Frame = 3 Query: 48 WNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFL 758 WNLRKCSAAALDVL+NVF +E+LP L+P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD NKRVQEAACS IL L+ AFGKYQ +NL I+YDAIGTLAD+VG LNQP Y+ LMPPLI KW L + DKDLFPLLEC +S+ AL +GFL Sbjct: 370 WNLRKCSAAALDVLANVFREELLPHLLPLLKGLLF---HPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVS----QPPDMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFL 599
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: TNPO2_HUMAN (Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 8.301e-62 Identity = 125/237 (52.74%), Postives = 159/237 (67.09%), Query Frame = 3 Query: 48 WNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFL 758 WNLRKCSAAALDVL+NVF +E+LP L+P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD NKRVQEAACS IL L+ AFGKYQ +NL I+YDAIGTLAD+VG LNQP Y+ LMPPLI KW L + DKDLFPLLEC +S+ AL +GFL Sbjct: 370 WNLRKCSAAALDVLANVFREELLPHLLPLLKGLLF---HPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVS----QPPDMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFL 599
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: TNPO_DICDI (Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.860e-54 Identity = 113/244 (46.31%), Postives = 159/244 (65.16%), Query Frame = 3 Query: 48 WNLRKCSAAALDVLSNVFGD-EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFLNLLSLY 776 W +RK SA A+DVLS +F D E L +P+I+ +++ W RE+A+LALGAIA+G GL PHLS+++ +LI L+D PL+RSI+CWTLSR+S +I Q +GR+ +++ LL RI+D NK+VQEAACS +IL + AFGKYQ +NL I+YDAI TLA VG ELN+P ++IL+PPL+ K+ L +S+K+L PLL C + ++GAG NL+SL+ Sbjct: 405 WTIRKSSAFAIDVLSGIFPDAEYLSVTLPLIEQRMNEQNP--WPVRESAILALGAIADGSKNGLAPHLSKVIPYLINTLNDPKPLVRSITCWTLSRYSYWIAQ----ADGRDYLHPLVVNLLNRIVDNNKKVQEAACSAFATLEEEADLLLIPYLQMILVTFVNAFGKYQAKNLLILYDAISTLAKVVGNELNKPELINILVPPLLQKFNALDDSNKNLLPLLGCLNQVCSSIGAGLQNLISLF 642
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: IMB2_SCHPO (Importin subunit beta-2 OS=Schizosaccharomyces pombe GN=kap104 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.087e-53 Identity = 106/236 (44.92%), Postives = 153/236 (64.83%), Query Frame = 3 Query: 48 WNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGKYQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGF 755 WNLRKCSAAALDVLS+ + +L ++P ++ L++ E WK +EA VLA+GAIAEGC+ G+ +L E+ + + LLD K PL+R+I+CWTL R+SK+ ++ ++ F +L GLL+ ++D NK+VQEA CS IL +L AF KYQR+N+ I+YDA+ TLAD VG LN Y+++L+ PL+ KW ++P+ D +LFPL EC +S+ AL GF Sbjct: 390 WNLRKCSAAALDVLSSFWKQRLLEIILPHLKQSLTS---EDWKVQEAGVLAVGAIAEGCMDGMVQYLPELYPYFLSLLDSKKPLVRTITCWTLGRYSKWASCLESEEDRQKYFVPLLQGLLRMVVDNNKKVQEAGCSAFAILEEQAGPSLVPYLEPILTNLAFAFQKYQRKNVLILYDAVQTLADYVGSALNDKRYIELLITPLLQKWSMIPDDDPNLFPLFECLSSVAVALRDGF 622
BLAST of EY736284 vs. ExPASy Swiss-Prot
Match: IMB2_YEAST (Importin subunit beta-2 OS=Saccharomyces cerevisiae GN=KAP104 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.752e-38 Identity = 92/241 (38.17%), Postives = 137/241 (56.85%), Query Frame = 3 Query: 48 WNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXXXXXIILQHLMMAFGK----YQRRNLKIVYDAIGTLADAVGFELNQPVYLDILMPPLIAKWQLLPNSDKDLFPLLECFTSITQALGAGFL 758 WNLRKCSAA LDV++N+ +++ P ++ L G + W REA +LALGA+AEG +K L ++ FL+ L+DK+ +R ++CWTLSRFS +I+QD E VL ++ ++D K VQEAA S + L+ +F K Y+++NL I+YDAIG A+ + + I++PPLI KW LL +SDK+L+PLLEC + + +LG F+ Sbjct: 397 WNLRKCSAATLDVMTNILPHQVMDIAFPFLREHL---GSDRWFIREATILALGAMAEGGMKYFNDGLPALIPFLVEQLNDKWAPVRKMTCWTLSRFSPWILQD-----HTEFLIPVLEPIINTLMDKKKDVQEAAIS--SVAVFIENADSELVETLFYSQLLTSFDKCLKYYKKKNLIILYDAIGRFAEKCALD---ETAMQIILPPLIEKWALLSDSDKELWPLLECLSCVASSLGERFM 624 The following BLAST results are available for this feature:
BLAST of EY736284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736284 ID=EY736284; Name=EY736284; organism=Citrus sinensis; type=EST; length=837bpback to top |