EY736248

Overview
NameEY736248
Unique NameEY736248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.034e-73
Identity = 170/285 (59.65%), Postives = 187/285 (65.61%), Query Frame = 1
Query:   28 ASSACLVGNILTTHKT-KTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLS-EKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            ASSACLVGN L+ + T K  LSK F GR     +SF S+ +  KV VVKASL  +K+ EGRR FLK L+GN GVG  L+ SGKA ADEQGVSSSRMSYSRFLEYLDKDRV KVDL+ENGTIAIVEA+SPELGNRV+RVRVQLPGLSQELLQK R KNIDFAAHNAQED GS+LFNLIGN                                   QSKAKFQMEPNTGVTFDDVAG    +  F                    IP+GVLL+GPP  GKT L  A+
Sbjct:    3 ASSACLVGNGLSVNTTTKQRLSKHFSGRQ----TSFSSVIRTSKVNVVKASLDGKKKQEGRRDFLKILLGNAGVG--LVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAI 280          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.825e-70
Identity = 160/285 (56.14%), Postives = 175/285 (61.40%), Query Frame = 1
Query:   28 ASSACLVGNILTTHKTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLSEKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADEQG--VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            ASSACL+GN L+ + TK    K               L++  KV VVKASL EK+HEGRRGF K L+GN   G  LL SG A ADEQG  VSSSRMSYSRFLEYLDK RV+KVDL+ENGTIAIVEA+SPELGNR+QRVRVQLPGLSQELLQK R KNIDFAAHNAQED GS + NLIGN                                   QSKAKFQMEPNTGVTFDDVAG    +  F                    IP+GVLLVGPP  GKT L  A+
Sbjct:    3 ASSACLLGNGLSVYTTKQRFQK-------------LGLDRTSKVTVVKASLDEKKHEGRRGFFKLLLGNAAAGVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIGNLAFPVILIGGLFLLSRRSSGGMGGPGGPGFPLQIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 273          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.426e-64
Identity = 145/238 (60.92%), Postives = 157/238 (65.97%), Query Frame = 1
Query:  166 VKASLSEKQHEGRRGFLKKLVGNVGVGT-ALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            V ASL  K ++ RR FLK  +GN+GVG   LLG+ +A A+EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK REKNIDFAAH+ QEDSGSLLFNLIGN                                   QS+AKFQMEPNTGVTFDDVAG    +  F                    IP+GVLLVGPP  GKT L  A+
Sbjct:   31 VTASLEHKTNDARRKFLKLALGNLGVGLPTLLGAKRALAEEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHSNQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRAQGGLGGPNGPGFPLGFGQSRAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 267          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.972e-32
Identity = 96/249 (38.55%), Postives = 123/249 (49.40%), Query Frame = 1
Query:  133 RSLEKKPKVAVVKASLSEKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADE-QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            R+     K+    +S SE     RR  L+     +G+G       +A A   + V+S+RMSYSRFLEYLD   VKKVD FENGT+A+ E       +RV RV+VQLPGL  EL++K R+K +DFAAH  +  +G +L +L+ N                                   +SKAKFQMEP TGVTFDDVAG    +  F                     P+GVLLVGPP  GKT L  A+
Sbjct:   30 RTTPPPAKITPPSSSSSEAAGLSRRRLLQSAGLGLGLGLTAARPARAEATAPEEVTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVDDAAALSRVHRVKVQLPGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVN---FGFPLLFVASLLWRSPTMNNPGGGPSLPFGLGKSKAKFQMEPKTGVTFDDVAGVDEAKQDFQEIVQFLKFPEKFTAVGART-PKGVLLVGPPGTGKTLLAKAI 274          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.287e-31
Identity = 87/213 (40.85%), Postives = 115/213 (53.99%), Query Frame = 1
Query:  241 VGTALLGSGKAYADEQ-GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            +GT L    KA  +     +S+RMSYSRFL++L ++ VKKVDL ENGT+AIVE  +P +G ++QRVRV LPGL  +L+++ +EKN+DFAAH    + G+ L N +GN                                   +SKAKFQMEPNTG+TF+DVAG    +  F                    IP+GVLL GPP  GKT L  A+
Sbjct:   71 LGTVLAHPAKAEPEAPIEATSNRMSYSRFLQHLKENEVKKVDLIENGTVAIVEISNPVVG-KIQRVRVNLPGLPVDLVREMKEKNVDFAAHPMNVNWGAFLLNFLGN----LGFPLILLVSLLLTSSSRRNPAGPNLPFGLGRSKAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAI 277          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29
Identity = 81/197 (41.12%), Postives = 105/197 (53.30%), Query Frame = 1
Query:  286 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            + ++SSRM+Y RFLEYLD   VKKVDL++ G  AIVEAI PELGNR+QR+RV+LP  + EL+ K R+ N+D  AH   + + +  ++LIGN                                   +SKA+FQME  TGVTF+DVAG    +  F                    IP+GVLLVGPP  GKT L  A+
Sbjct:   36 KNIASSRMTYGRFLEYLDLGWVKKVDLYDEGHTAIVEAIGPELGNRIQRIRVELPATAPELITKLRKANVDLDAHATNDSTPA--WSLIGN---LIFPILLIAGLAFLFRRSSNLPGGPGQAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSF-LKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAI 226          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 81/195 (41.54%), Postives = 102/195 (52.31%), Query Frame = 1
Query:  292 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            ++SSRM+Y RFLEYLD   VK+VDL+EN   AIVEA+ PELGNRVQR+RV+LP  + EL+ K R+ N+D  AH  +  S S ++ L+GN                                   +SKA FQME  TGV F+DVAG    +  F                    IP+GVLLVGPP  GKT L  A+
Sbjct:   38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPK--STSAVWGLLGN---LLFPLILVGGLAFLFRRSNNASGGPGQAMSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQ-EVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAI 226          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 81/195 (41.54%), Postives = 102/195 (52.31%), Query Frame = 1
Query:  292 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            ++SSRM+Y RFLEYLD   VK+VDL+EN   AIVEA+ PELGNRVQR+RV+LP  + EL+ K R+ N+D  AH  +  S S ++ L+GN                                   +SKA FQME  TGV F+DVAG    +  F                    IP+GVLLVGPP  GKT L  A+
Sbjct:   38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPK--STSAVWGLLGN---LLFPLLLVGGLAFLFRRSNNASGGPGQAMSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQ-EVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAI 226          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23
Identity = 71/195 (36.41%), Postives = 101/195 (51.79%), Query Frame = 1
Query:  292 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            V SS+M+Y RFLEYL+   V +VDL++N   AIV+A SPELGNR Q +RV++P  + +L+QK +E NIDF AH A++   ++  N++ N                                   +S A+F+  P+TGV+F D+AG    +T F                    IP+G+LLVGPP  GKT L  A+
Sbjct:   50 VISSKMTYGRFLEYLEMGWVNQVDLYDNSRNAIVQASSPELGNRPQTIRVEIPVGASQLIQKLKEYNIDFDAHPAEQK--NIFVNILSN--ILLPIIFITGLVYLFQNSENFGGGSGQSPMSLGKSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSF-LKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAI 239          
BLAST of EY736248 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21
Identity = 69/194 (35.57%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  295 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKAKFQMEPNTGVTFDDVAGG**GQTRFHGSGGVPXXXXXXXXXXXXVIPRGVLLVGPPELGKTFLPGAL 876
            SSSRM+Y RFLEY+D + VKKVDL++N   AIV+ I+P++    Q VRV+LP  S EL+ K + K IDF AH +  +      NL+                                     ++KA+F ME  TG+ F+DVAG    +                       IP+GVLLVGPP  GKT L  A+
Sbjct:   37 SSSRMTYGRFLEYIDMNWVKKVDLYDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVSKLKNKLIDFDAHPSSSN-----VNLVSWLSNLLLPLILIITLFFFFRRGNKSSSGPGQAFNFGKAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAF-LKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAI 224          
The following BLAST results are available for this feature:
BLAST of EY736248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FTSH2_ARATH1.034e-7359.65Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH8_ARATH1.825e-7056.14Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH2_ORYSJ7.426e-6460.92Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH6_ORYSJ1.972e-3238.55Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH6_ARATH8.287e-3140.85Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_GUITH7.756e-2941.12Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH_PORPU1.463e-2741.54Cell division protease ftsH homolog OS=Porphyra pu... [more]
FSTH_PORYE1.463e-2741.54Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_ODOSI1.281e-2336.41Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_CYACA1.199e-2135.57Cell division protease ftsH homolog OS=Cyanidium c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-G09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736248 ID=EY736248; Name=EY736248; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGCCCACGCGTCCGGGAAGCTTCATCAGCTTGCCTTGTAGG
GAATATTTTGACAACACACAAGACTAAAACAAATTTGAGCAAGGACTTCC
ATGGTAGGCATCTTCTGTTTAACTCGAGTTTTCGATCATTGGAAAAGAAG
CCAAAAGTAGCCGTTGTAAAGGCATCTTTGAGCGAGAAGCAGCATGAAGG
AAGAAGAGGGTTTCTTAAGAAGTTGGTTGGAAATGTTGGAGTTGGTACTG
CTTTGTTGGGGAGTGGGAAAGCCTATGCCGATGAACAGGGGGTTTCTTCC
TCTAGGATGTCTTACTCTAGGTTCTTGGAGTATCTTGATAAGGACAGGGT
GAAGAAGGTTGATTTGTTTGAGAATGGTACCATAGCTATTGTGGAGGCTA
TTTCCCCTGAGTTGGGTAACCGGGTGCAACGAGTTCGCGTTCAACTTCCA
GGTCTAAGTCAGGAGCTTCTCCAGAAATTCAGGGAGAAGAACATTGATTT
TGCTGCCCATAATGCTCAAGAGGACTCAGGATCATTGTTGTTTAACTTGA
TTGGGAATCTGGCTTTCCCACTTATCTTAATTGGAGGGCTGTTCCTTCTC
TCAAGGCGTTCATCTGGTGGAATGGGCGGTCCTGGTGGGCCTGGTTTCCC
CCTTGCCTTTGGTCAGTCCAAAGCTAAATTCCAGATGGAACCAAATACTG
GTGTGACATTTGATGATGTTGCCGGAGGTTGATGAGGGCAAACAAGATTT
CATGGAAGTGGTGGAGTTCCTTTACAAGGCTTGAAAGATTTACAGCTGTT
GGAGCTCGTTATCCCCAGGGGTGTTCTCCTCGTGGGTCCTCCAGAACTGG
GGAAAACCTTCCTGCCCGGGGCATTGGTGGTGAATC
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