EY736247

Overview
NameEY736247
Unique NameEY736247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736247 vs. ExPASy Swiss-Prot
Match: Y1607_METJA (Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii GN=MJ1607 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 63/205 (30.73%), Postives = 107/205 (52.20%), Query Frame = 1
Query:   37 TAANKIRIWRKGVDSESFHPRFRSSE-MRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PGARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGPAARQEM-DKYDW 621
            T  +K+++   G++   F       E + +R S G + D+ +I+ VGRL  +K +++L R M ++     A++   G G  R+ LE +   +      VF G + G+ L + Y S DV V+PS  E  G+V LEAM++G PVV    GG+ +II  + +G   Y  NP   D     ++ +L +   RE +   A++++ +KY W
Sbjct:  169 TPEDKVKVIYNGINPWEFDINLSWEEKINFRRSIGVQDDEKMILFVGRLTYQKGIEYLIRAMPKILERHNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVNGDTLKKLYKSADVVVIPSVYEPFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNP---DSIAWGVDRVLSDWGFREYIVNNAKKDVYEKYSW 370          
BLAST of EY736247 vs. ExPASy Swiss-Prot
Match: YPJH_BACSU (Uncharacterized glycosyltransferase ypjH OS=Bacillus subtilis GN=ypjH PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 43/161 (26.71%), Postives = 85/161 (52.80%), Query Frame = 1
Query:  142 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPG---ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGPAARQEMD 609
            PD+ +++HV      K +  + RV   + G   A++  +GDGP +    ++          ++LG +  +   Y+  D+ ++ SE E+ GLV+LEAM+ G+P +G   GGIP++I   ++   G+L + GD+    ++   +L +++L      AA + ++
Sbjct:  197 PDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPEKSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIGGIPEVI---KNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLE 354          
BLAST of EY736247 vs. ExPASy Swiss-Prot
Match: COTSA_BACSU (Spore coat protein SA OS=Bacillus subtilis GN=cotSA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 60/232 (25.86%), Postives = 109/232 (46.98%), Query Frame = 1
Query:   10 GKDLEAARVTAANKIRIWRKGVDSESFHPRFRSSEMR----WRLSNGEPDKPLIVHVGRLGVEKS----LDFLKRVMDRLPGARIAFIGDGPYRE-ELEKMFTGMPAV---------FTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCLSKLEPLLYNQELRETMGPAARQEMD-KYDWRAATRTI 642
            G+ + +   +A +K +    GVD +++HPR+ +   R     R   G   K +++ VGRL   K     L  L  +++  P   + FIG   + + EL      +  +         F   +  +++ + Y   DVFV  S+  E L  V  EAM++G+P++    GG P++I E ++G I + F NP    +   ++  LL + E RE +G  +R+E +  + W+     +
Sbjct:  141 GQTITSRFPSARSKTKTVYSGVDLKTYHPRWTNEGQRAREEMRSELGLHGKKIVLFVGRLSKVKGPHILLQALPDIIEEHPDVMMVFIGSKWFGDNELNNYVKHLHTLGAMQKDHVTFIQFVKPKDIPRLYTMSDVFVCSSQWQEPLARVHYEAMAAGLPIITSNRGGNPEVIEEGKNGYIIHDFENPKQYAE---RINDLLSSSEKRERLGKYSRREAESNFGWQRVAENL 369          
BLAST of EY736247 vs. ExPASy Swiss-Prot
Match: LPSE_RHIME (Lipopolysaccharide core biosynthesis glycosyltransferase lpsE OS=Rhizobium meliloti GN=lpsE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 45/156 (28.85%), Postives = 75/156 (48.08%), Query Frame = 1
Query:  145 DKPLIVHVGRLGVEKSLDFLKRVMDRLPGARIAFIGDGPYREELEKMFTGMPAVFTGMLLG--EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGPAARQEM 606
            D P+++ +GR    K    L   + RLPG  +  +GDG  R+ L K+ T +         G  ++     A+ DVFVM S  E LG V+LE+ + G PVV  R+ G    +   +DG+ G + + GD +     +E ++ +  LR  +     + +
Sbjct:  167 DAPVVMSMGRFVERKGFHTLIEAVARLPGVYLWLLGDGEERDNLHKLATDLGVSGRVRFAGWQDDTRPFLAAVDVFVMSSSHEPLGNVILESWAQGTPVVSTRSEGPQWFM---RDGENGLMVDIGDAEGFARAIEQIVADNSLRTRLAERGHETL 319          
The following BLAST results are available for this feature:
BLAST of EY736247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
Y1607_METJA3.135e-1630.73Uncharacterized glycosyltransferase MJ1607 OS=Meth... [more]
YPJH_BACSU2.103e-1226.71Uncharacterized glycosyltransferase ypjH OS=Bacill... [more]
COTSA_BACSU1.363e-1125.86Spore coat protein SA OS=Bacillus subtilis GN=cotS... [more]
LPSE_RHIME3.965e-1128.85Lipopolysaccharide core biosynthesis glycosyltrans... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-G08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736247 ID=EY736247; Name=EY736247; organism=Citrus sinensis; type=EST; length=848bp
CACGCGTCCGGAAAGGATCTTGAAGCAGCTCGGGTGACTGCAGCTAATAA
GATTCGTATTTGGAGAAAGGGTGTTGATTCCGAAAGCTTCCACCCACGTT
TTCGCTCTAGTGAAATGCGATGGAGACTAAGTAATGGCGAACCAGATAAA
CCATTGATAGTCCATGTTGGACGTCTTGGGGTTGAGAAGAGTTTGGATTT
TCTGAAAAGGGTCATGGATAGACTTCCGGGGGCTCGAATTGCTTTCATCG
GAGATGGCCCATACAGGGAGGAACTGGAGAAAATGTTTACAGGAATGCCT
GCAGTATTTACCGGGATGTTACTCGGTGAAGAGCTGTCTCAGGCATATGC
TAGTGGGGATGTTTTTGTGATGCCTTCAGAATCTGAGACACTCGGCCTTG
TTGTTTTGGAGGCCATGTCTTCTGGCATTCCTGTGGTGGGAGTTCGCGCT
GGGGGAATTCCTGATATAATTCCTGAAGATCAGGATGGCAAAATTGGCTA
TCTGTTTAATCCAGGTGATCTTGATGATTGCTTGAGCAAATTGGAGCCTC
TGCTATATAACCAGGAGTTGAGAGAAACCATGGGCCCAGCCGCACGACAG
GAAATGGACAAATATGATTGGAGAGCAGCCACTAGAACGATCCGGCCTGA
GCCATACACTGCTGCCCACTGGTCCCGGCGCCCACAGAGAGCCCCCCCAC
TGAGACCTATACCACGGGCTGGCACCACGCCTTTCCCCCTCCGGCCCAAC
TCAGCTACAGGTGGATGCGGGAAGACTGCACGGAGGGTGCTCCGGCCCCA
GGACTGACGCCCCGCCTCGCGCAACGCCTCCCGGGGTGGGGCGCGAGT
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