EY736245

Overview
NameEY736245
Unique NameEY736245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736245 vs. ExPASy Swiss-Prot
Match: AGD8_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.199e-48
Identity = 95/141 (67.38%), Postives = 122/141 (86.52%), Query Frame = 3
Query:    9 ASAKSSSFFADYGMDNGFQKKSGS--SKVQIQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDRIL 425
            A  KSSSFF+D+GMD+ F KKS S  SK Q++E+DEARKKF+NAKSISS+Q+FGDQN + D++++ +LQKF+GSASISSAD +GHD D++++D+ ASDLINRLSFQAQQD+SSL NIAGET KKL +LAS + +DIQDR+L
Sbjct:  273 APPKSSSFFSDFGMDSSFPKKSSSNSSKSQVEESDEARKKFTNAKSISSAQYFGDQNKNADLESKATLQKFAGSASISSADFYGHDQDDSNIDITASDLINRLSFQAQQDLSSLVNIAGETKKKLGTLASGIFSDIQDRML 413          
BLAST of EY736245 vs. ExPASy Swiss-Prot
Match: AGD9_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD9 OS=Arabidopsis thaliana GN=AGD9 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.535e-45
Identity = 90/141 (63.83%), Postives = 118/141 (83.69%), Query Frame = 3
Query:    9 ASAKSSSFFADYGMDNGFQKKSGSS--KVQIQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDRIL 425
            A  KSS+FF ++GMD+ F KKS SS  K Q++ETDEARKKFSNAKSISS+QFFG+QN   D+D++ +LQKFSGSA+ISS+DLFGH  D++++D+ ASDLINR+SFQAQQD+SS+ N+A ET  KL + ASS+ +D+QDR+L
Sbjct:  262 APPKSSNFFNEFGMDSAFPKKSSSSSSKAQVEETDEARKKFSNAKSISSAQFFGNQNRDADLDSKATLQKFSGSAAISSSDLFGHGPDDSNIDITASDLINRISFQAQQDMSSIANLAEETKNKLGTFASSIFSDLQDRML 402          
BLAST of EY736245 vs. ExPASy Swiss-Prot
Match: AGD10_ARATH (ADP-ribosylation factor GTPase-activating protein AGD10 OS=Arabidopsis thaliana GN=AGD10 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.541e-37
Identity = 88/134 (65.67%), Postives = 105/134 (78.36%), Query Frame = 3
Query:    9 ASAKSSSFFADYGMDNG--FQKK--SGSSKVQIQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSL 398
            A  KSS FF +    NG  FQKK  + SSK+QIQETDEARKKF+NAKSISS+Q+FG+ NNS D++ + SL+KFSGS++ISSADLFG    +  LDL A DL+NRLS QAQQDISSLKN+A ET KKL S+ASSL
Sbjct:  260 APPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETDEARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGDGDFPLDLTAGDLLNRLSLQAQQDISSLKNMAEETKKKLGSVASSL 393          
BLAST of EY736245 vs. ExPASy Swiss-Prot
Match: ARFG3_PONAB (ADP-ribosylation factor GTPase-activating protein 3 OS=Pongo abelii GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 3
Query:   93 IQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDR 419
            ++ TDEA+KKF N K+ISS  +FG Q  + D +T+  L++ S S+SISSADLF      A+ + + S ++      AQ     ++++AG    KLS  A+ ++T IQDR
Sbjct:  411 VENTDEAQKKFGNVKAISSDMYFGRQAQA-DYETRARLERLSASSSISSADLFEEQRKQAAGNYSLSSVLPNAPDMAQFK-QGVRSVAG----KLSVFANGVVTSIQDR 513          
BLAST of EY736245 vs. ExPASy Swiss-Prot
Match: ARFG3_MACFA (ADP-ribosylation factor GTPase-activating protein 3 OS=Macaca fascicularis GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 3
Query:   93 IQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDR 419
            ++ TDEA+KKF N K+ISS  +FG Q  + D +T+  L++ S S+SISSADLF      A+ + + S+++      AQ     ++++AG    KLS  A+ ++T IQDR
Sbjct:  411 VENTDEAQKKFGNVKAISSDMYFGRQAQA-DYETRARLERLSASSSISSADLFEEQRKQAAGNYSLSNVLPSAPNMAQFK-QGVRSVAG----KLSVFANGVVTSIQDR 513          
BLAST of EY736245 vs. ExPASy Swiss-Prot
Match: ARFG3_HUMAN (ADP-ribosylation factor GTPase-activating protein 3 OS=Homo sapiens GN=ARFGAP3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.834e-11
Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 3
Query:   93 IQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDR 419
            ++ TDEA+KKF N K+ISS  +FG Q+ + D +T+  L++ S S+SISSADLF       + + + S ++      AQ     ++++AG    KLS  A+ ++T IQDR
Sbjct:  411 VENTDEAQKKFGNVKAISSDMYFGRQSQA-DYETRARLERLSASSSISSADLFEEPRKQPAGNYSLSSVLPNAPDMAQFK-QGVRSVAG----KLSVFANGVVTSIQDR 513          
The following BLAST results are available for this feature:
BLAST of EY736245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AGD8_ARATH3.199e-4867.38Probable ADP-ribosylation factor GTPase-activating... [more]
AGD9_ARATH2.535e-4563.83Probable ADP-ribosylation factor GTPase-activating... [more]
AGD10_ARATH2.541e-3765.67ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_PONAB8.231e-1239.45ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_MACFA8.231e-1239.45ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_HUMAN1.834e-1138.53ADP-ribosylation factor GTPase-activating protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-G05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736245 ID=EY736245; Name=EY736245; organism=Citrus sinensis; type=EST; length=864bp
CCACCCACGCGTCCGCAAAGTCGTCAAGCTTCTTTGCTGATTATGGAATG
GACAATGGTTTTCAAAAGAAGTCCGGCTCCTCAAAAGTACAAATTCAAGA
AACTGATGAAGCAAGGAAGAAGTTCTCTAATGCAAAATCTATTTCATCAT
CCCAATTTTTTGGGGATCAGAACAACTCTATTGACATGGATACTCAAGTT
TCTTTGCAAAAGTTCTCAGGTTCAGCATCGATCTCTAGTGCTGATCTGTT
TGGTCATGACTCTGACAATGCCTCACTTGATCTTGCTGCTAGTGACCTCA
TCAACAGACTCTCATTCCAGGCACAACAAGATATCTCTTCTCTGAAGAAC
ATTGCGGGAGAGACTGGAAAGAAACTTAGCTCCTTGGCGTCAAGTCTGAT
AACAGATATTCAAGACAGAATACTCTGAAAATCTTCGAATATGTCTGGAG
TTTGTTACATTTACCACCCTACATCTTGTGTAGGAAATGTAAAATGAGTT
TGATCATAAAATTCTTTTGGAAGACCAATAACATTTTAGAATTCTGCTGG
CATACTACCGACTGCGCTTTTTATTGTGGTTTCAGCAGTGTTTGTTTTGA
GACTAGTCTCATGTGCCTTTCATCTACTGGATCGATTCAATATTATGTAC
CTTCGTGGCTTCGTTGTAAACCAGCGAACCTATACCATATTTTTACATTT
ATTATTCGTCCCGCTCGTGGCCAGGGACTTTGTACAACAACAAAAAAACG
CGGGGCCGCTCTTAACGATCCAGACCTTCATAAGCGCTGCTTGCGACGTC
AAAGCCCCTCTATTATTGTCCCCACAATCACAATCACTCCGCGTCCCCTC
CCACACCGCCCAAT
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