EY736237

Overview
NameEY736237
Unique NameEY736237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736237 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.817e-43
Identity = 89/141 (63.12%), Postives = 100/141 (70.92%), Query Frame = 1
Query:  172 EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTVGIPAPTIATG 594
            E V+ LHGDLDLKI++ARRLPNMDM SEHLRR FTAC+ C  P  T +    D G                DPYVTVVVPQAT+ARTRVLKNSQEP+W+E FNI +AHP + LE QVKDDDVFGAQIIGT  IP   IA+G
Sbjct:    7 EDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDKNIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAKIPVRDIASG 147          
BLAST of EY736237 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17
Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  139 RYMAAGDDSDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTVGIPAPTIATG 594
            +Y+     S   +V  LHG+LD+ +  A+ LPNMD     L    +                   G+               DPYVTV +  A + RT V+ NS+ PVW +HF++P+AH  + +   VKD D+ G+QI+G VGIP   + +G
Sbjct:   24 QYVPFATSSGSLRVELLHGNLDIWVKEAKHLPNMDGFHNRLGGMLS-------------------GLGRKKVEGEKSSKITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAEVHFVVKDSDIIGSQIMGAVGIPTEQLCSG 156          
BLAST of EY736237 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17
Identity = 52/140 (37.14%), Postives = 69/140 (49.29%), Query Frame = 1
Query:  175 KVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTVGIPAPTIATG 594
            KV+  HG+LD+ I  A+ LPNMDM                     H+T  D  G                DPYV+V V  A + RT V+ NS+ PVW +HF +P+AH  + +   VKD DV G+Q+IG V IP   I +G
Sbjct:  150 KVLLSHGNLDIWIYHAKNLPNMDMF--------------------HKTLGDMFGRLPGKIEGQLTSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSG 269          
BLAST of EY736237 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16
Identity = 49/144 (34.03%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  175 KVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDD----GVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTVGIPAPTIATG 594
            +V  LHG+LD+ +  A+ LPNMD                      H T         G R+             DPYVTV +  A + RT V+ NS+ PVW +HF++P+AH  + +   VKD D+ G+QIIG V IP   + +G
Sbjct:   40 RVELLHGNLDIWVKEAKHLPNMDGF--------------------HNTLVGGMFFGLGRRNHKVDGENSSKITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAKVHFVVKDSDIIGSQIIGAVEIPTEQLCSG 163          
BLAST of EY736237 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16
Identity = 52/154 (33.77%), Postives = 73/154 (47.40%), Query Frame = 1
Query:  175 KVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTVGIPAPTIATGRSHLDDGTTSIAPS 636
            KV+ LHG+LD+ +  A  LPN+D+                     H+T     G                DPYV++ V  A + RT V+ NS+ PVW +HF +P+AH  + +   VKD D  G+Q+IG V IP   I +G     +GT SI  S
Sbjct:  111 KVLLLHGNLDIWVSCANNLPNLDLF--------------------HKTLGVVFGGMTNMIEGQLSKKITSDPYVSISVAGAVIGRTYVISNSENPVWQQHFYVPVAHHAAEVHFVVKDSDAVGSQLIGIVTIPVEQIYSGAR--IEGTYSIRDS 242          
BLAST of EY736237 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.093e-15
Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = 1
Query:  187 LHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXXXXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTVGIPAPTIATG 594
            LHG+LD+ +  A+ LPNM               +C            + G R              DPYVTV +  A + RT V+ NS+ PVW +HF++P+AH  + +   VKD+D  G++IIG VGIP   + +G
Sbjct:   34 LHGNLDIWVKEAKHLPNM---------------ICYRNKLVGGISFSELGRRIRKVDGEKSSKFTSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAEVHFVVKDNDPIGSKIIGVVGIPTKQLCSG 154          
The following BLAST results are available for this feature:
BLAST of EY736237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PLDD1_ARATH1.817e-4363.12Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDG1_ARATH1.311e-1732.24Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDB1_ARATH1.311e-1737.14Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDG3_ARATH7.194e-1634.03Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDB2_ARATH7.194e-1633.77Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG2_ARATH2.093e-1533.82Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736237 ID=EY736237; Name=EY736237; organism=Citrus sinensis; type=EST; length=863bp
CACGCCGTCGCAACGCCTCACTGCACGTCGTTTTCGTCTATCTTATCTGC
TAATCGTTCCATTCTATTATTGATTTCTTTCTCCACTGTCATTATTATTT
GCACATTTGAAGCTTCTAATCGATCCTTGATTCGCGTACGGTACATGGCG
GCCGGAGACGATTCCGATAAAGAAAAGGTCATCTACCTTCACGGTGACCT
GGACTTGAAAATCATTCGAGCCCGGCGGTTACCTAACATGGACATGATGT
CCGAACACCTCCGACGTTGTTTCACAGCCTGTGACGTTTGCAAAACTCCC
GCCCCGACGCACGAGACCTTTCAGGACGATGACGGAGTCCGGCACACCAG
CAAAATCATCCGCAAGAGTAAGATCATCACCAGTGACCCTTACGTCACCG
TCGTGGTCCCTCAAGCCACCGTCGCCCGTACACGTGTCCTTAAAAATTCC
CAAGAGCCTGTCTGGAACGAGCACTTCAACATTCCCTTAGCGCATCCCCT
TTCCAACCTCGAGATTCAGGTCAAAGATGACGACGTCTTCGGCGCCCAAA
TCATCGGCACCGTCGGAATCCCTGCTCCCACCATCGCGACCGGGCGATCT
CATCTCGACGATGGTACCACATCCATTGCCCCTTCCGGGTAGTCCACCTT
AGCCCTGGTGCATCTATACCACTCGAACCTTACGTCCCCCCCCGGTGACC
CAAACCCGCTGGTATCCGCCCGGCCTTTCCCGGCCACCCTGCGCCGCTAT
GGGGTGGCGGAACCCCGTCTGGCGCCGGAGTGGGGGGGGCCCCGCTTTAC
ACCCCTCCCAACACTCCCCCCCCCCACAGAGCGGGCCTCTCACTGCAACC
TCCTTACGCTGCG
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