EY736233

Overview
NameEY736233
Unique NameEY736233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 2.134e-97
Identity = 182/252 (72.22%), Postives = 195/252 (77.38%), Query Frame = 3
Query:   63 MSSCINPSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKGILSLHEASYYSLEGESIMEGGLAIHQ*ASXRNDDHPAQQGRGCIGSKTSEAGAGAPSAWESAMLKARW 818
            MSSCINPSTL TSVN FKCLPLATN+AAIRIMAK KPVQCL+S KYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKVK AIKDV EPLDQLELIDNLQRLGLA+ FE E            KDYNWRKENLYATSLEFRLLRQHGYPVSQEVF+GFKDD+ GFICDDFKGILSLHEASYYSLEGESIME           +              ++ ++     P  W+  ML+ARW
Sbjct:    1 MSSCINPSTLVTSVNAFKCLPLATNKAAIRIMAKYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTS-KHLKEVMISKNMEEDVFVAEQAKRALELPLHWKVPMLEARW 251          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.805e-43
Identity = 102/242 (42.15%), Postives = 142/242 (58.68%), Query Frame = 3
Query:  126 LATNRAAIRIMAKNKPVQCLVSTKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN-WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEGGLAIHQ*ASXRNDDHPAQQGRGCIGSKTSEAGAGAPSAWESAMLKARWSYTFMR 836
            L T+R     +A+  PVQC+V+ K      + RRSANYQPSIW+HD+++SL   Y  ET  R+   LK +V+  +  V  PL+QLELI+ LQRLGL+YHFE E               + W+ ENLYAT+L+FRLLRQHGY VSQEVF+ FKD++  F   +C+D KG+LSL+EAS++ +EGE+I+E         S ++ +   +Q +    +         P  W    L+ARW     R
Sbjct:   27 LVTSRTRNGYLAR--PVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDF----STKHLEEYVKQNKEKNLATLVNHSLEFPLHWRMPRLEARWFINIYR 262          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.153e-34
Identity = 80/173 (46.24%), Postives = 105/173 (60.69%), Query Frame = 3
Query:  171 PVQCLV--STKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDD----KVGFICDDFKGILSLHEASYYSLEGESIME 671
            P+QC +  S   D  T+ RRSANY P IW  DF+QSL   Y  E Y  R+ +LK +VK  +  +   L QLELID LQRLG++YHFE E                  K +LYAT+LEFRLLR++GY + QE+F+ FKD+    K     DD KG+L+L+EAS+Y   GE+I+E
Sbjct:   53 PIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILE 225          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.722e-30
Identity = 85/223 (38.12%), Postives = 123/223 (55.16%), Query Frame = 3
Query:   45 TASVYPMSSCIN----PSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTV------DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVG----FICDDFKGILSLHEASYYSLEGESIME 671
            ++S  P+ S I+    P T  TS++  K  P   +++ ++  +++     +  T  DN +       DRRSANY P IW  DF+QSL   Y  E+Y  R  +L+  VK  +  V   L QLELID +QRLG++Y FE E             D      +LYAT+L+FRLLRQ+G+ V QE+F+ FK+ K G     I +D  G L L+EAS++  +GESI+E
Sbjct:   11 SSSSLPIWSSIDNRFTPKTSITSIS--KPKPKLKSKSNLKSRSRSSTCYSIQCTVVDNPSSTITNNSDRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILE 231          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.159e-28
Identity = 73/154 (47.40%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  213 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXK-------DYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD--DFKGILSLHEASYYS 647
            V RRSANYQPS+W H++L SL + Y  E    R   LK +V   + +    L+QLELID LQRLG++YHFE E                    D N R  +LYAT+LEFRLLRQHG+ ++Q+VF G     +G   D  D KGILSL+EASY S
Sbjct:   24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRN-RWGDLYATALEFRLLRQHGFSIAQDVFDG----NIGVDLDDKDIKGILSLYEASYLS 172          

HSP 2 Score: 25.409 bits (54), Expect = 4.159e-28
Identity = 11/43 (25.58%), Postives = 23/43 (53.49%), Query Frame = 1
Query:  670 KEAWQFTSKHLXEMMITQHSKEEDVLVAKQAKRALELPLHGKV 798
            KE+  +T+K L + +    ++ +   + +    ALE+P H +V
Sbjct:  180 KESIYYTTKRLRKFVEVNKNETKSYTLRRMVIHALEMPYHRRV 222          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 76/206 (36.89%), Postives = 111/206 (53.88%), Query Frame = 3
Query:  210 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKGILSLHEASYYSLEGESIMEGGLAIHQ*ASXRN--DDHPAQQGRGCIGSKTSEAGAGAPSAWESAMLKARW 818
            TV RRSANYQPS WDH  L S+ + +  +   R  + LK KV+  + D  +  LDQLE ID+LQ+LG++YHFE E            +  N ++ +L+AT+LEFRL RQHG+ VS++VF  F ++   F  DD  G++SL+EASY S + +  ++  +        R+  D H  +    C   +        P  W+   L  RW
Sbjct:   43 TVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRT-NIQESDLHATALEFRLFRQHGFNVSEDVFDVFMENCGKFDRDDIYGLISLYEASYLSTKLDKNLQIFIRPFATQQLRDFVDTHSNEDFGSCDMVEIVVQALDMPYYWQMRRLSTRW 247          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.155e-26
Identity = 76/207 (36.71%), Postives = 119/207 (57.49%), Query Frame = 3
Query:   75 INPSTLATSVNGFKCLPLATNRAA-IRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN---WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK-VGF---ICDDFKGILSLHEASYYSLEGESIME 671
            +N S L+  +N    L    ++A  +   A    ++   S+K       RRS NYQP++WD +++QSLN+ YT+E +  R  EL  +V+  +K+  EP+ QLELI +L+ LGL+  F+ E            K ++     K +LY T+L FRLLRQHG+ +SQ+VF+ FK++K + F   +  D KG+L L+EAS+   +GE  +E
Sbjct:    6 MNVSILSKPLNCLHNLERRPSKALLVPCTAPTARLRASCSSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLE 212          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.489e-26
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  135 NRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKVGFICDDFKGILSLHEASYYSLEGES 662
            +R   + M K  P   LV        + RRS NYQPS W+H +L S+ + Y  ET     + LK KVK+ + D  +  L+QLELID+LQ+LG++YHFE E                W   ++E+L+ATSLEFRLLRQHG+ VS+ +F    D  +   F  ++  GI+SL+EASY S + ++
Sbjct:   26 HRFVCKSMTKTTPDTTLVE-------LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVIIDQIESNTFKTNNINGIISLYEASYLSTKSDT 200          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.179e-25
Identity = 74/219 (33.79%), Postives = 112/219 (51.14%), Query Frame = 3
Query:  207 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV--TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKVGFICDDFKGILSLHEASYYSLEGESIMEGGLAIHQ*ASXRNDDHPAQQGRGCIGSKTSEAGAGAPSAWESAMLKARWSYTFMRKK 842
            L + RRS NYQPS WDH +L S+ + Y +E        LK KVK  +++V     L++LELID+LQ+LG++YHFE E                W   ++E+L+AT+LEFRLLRQHG+ VS+++F    D  +   F  D+   I++L+EASY S + ++ +   +        RN      +    +  + +      P  W    L+ RW      KK
Sbjct:   43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVIIDKIESNTFKSDNITSIITLYEASYLSTKSDTKLHKVIRPFATEQIRNFVDDESETYNIMLREMAIHALEIPYHWRMRRLETRWYIDAYEKK 261          
BLAST of EY736233 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.846e-25
Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 3
Query:  219 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKV----GFICDDFKGILSLHEASYYSLEGESIME 671
            RRS +YQPS+WD +++QSLN+ Y ++ +  R  EL  +V+  +K   E + QLELID+LQ LGL+Y F+ E            + ++    +LY T+L FR+LRQHG+ VS++VF  FK +K       +  D KG+L L+EAS+   EGE  +E
Sbjct:   52 RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHNEPRYFH--NNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLE 204          
The following BLAST results are available for this feature:
BLAST of EY736233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RLC1_CITLI2.134e-9772.22(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL8.805e-4342.15Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA1.153e-3446.24(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA1.722e-3038.12(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
OCIS_ARATH4.159e-2847.40(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
MYRS1_ARATH8.001e-2836.89Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]
BPPS_SALOF1.155e-2636.71(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
CINS_ARATH7.489e-2640.111,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH2.179e-2533.79Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
SSS_SALOF2.846e-2541.29(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-E10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736233 ID=EY736233; Name=EY736233; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCCTTCCCAAGTATACCTGTAAGCTAGCTTACACTGCA
TCTGTATATCCAATGTCTTCTTGCATTAATCCCTCAACCTTGGCTACCTC
TGTAAATGGTTTCAAATGTCTTCCTCTTGCAACAAATAGAGCAGCCATCA
GAATCATGGCAAAAAATAAGCCAGTCCAATGCCTTGTCAGCACCAAATAT
GATAATTTGACAGTTGATAGGAGATCAGCAAACTACCAACCTTCAATTTG
GGACCATGATTTTTTGCAGTCACTGAATAGCAACTATACGGATGAAACAT
ACAAAAGACGAGCAGAAGAGCTGAAGGGAAAAGTGAAGACAGCGATTAAG
GATGTAACCGAGCCTCTGGATCAGTTGGAGCTGATTGATAATTTGCAAAG
ACTTGGATTGGCTTATCATTTTGAGCCTGAGATTCGGAACATATTGCGTA
ATATCCACAACCATAATAAAGATTATAATTGGAGAAAAGAAAATCTGTAT
GCAACCTCCCTTGAATTCAGACTACTTAGACAACATGGCTATCCTGTTTC
TCAAGAGGTTTTCAGTGGTTTTAAAGACGACAAGGTAGGCTTCATTTGTG
ATGATTTCAAGGGAATACTGAGCTTGCATGAAGCCTCGTATTACAGCTTA
GAAGGAGAAAGCATCATGGAAGGAGGCCTGGCAATTCACCAGTAAGCATC
TTANAGAAATGATGATCACCCAGCACAGCAAGGAAGAGGATGTATTGGTA
GCAAAACAAGCGAAGCGGGCGCTGGAGCTCCCTCTGCATGGGAAAGTGCT
ATGTTAAAGGCAAGGTGGTCATACACGTTTATGAGAAAAAAAGGACAAGA
CC
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