EY736226

Overview
NameEY736226
Unique NameEY736226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736226 vs. ExPASy Swiss-Prot
Match: Y5986_ARATH (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.940e-26
Identity = 65/162 (40.12%), Postives = 98/162 (60.49%), Query Frame = 1
Query:  277 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK-----NVTLPQVFIRGKHVGNADVLKSMYETGELARVL---DGFPRRQPGF--VCGSCGDVTFVPCWNCIGDPKVFNEG----NGVPKRGWA----CAQQGLNPC 708
            ++R+V+Y TSLRGIR+T+EDC  +R+I +   + +DERDVSM S +K EL+ +  GK      +TLP+VF+  K++G  + +K + E GEL +++   +      PGF   C +CGDV FVPC  C G  K+++EG     GV + G+     C + GL  C
Sbjct:  224 KERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRC 385          
BLAST of EY736226 vs. ExPASy Swiss-Prot
Match: Y3885_ARATH (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.261e-24
Identity = 57/135 (42.22%), Postives = 86/135 (63.70%), Query Frame = 1
Query:  277 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG-----GKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQP-----GFVCGSCGDVTFVPCWNCIGDPKVFNE 651
            ++R+++Y TSLRGIR+T+E+   VR+I +   + VDERDVSM S +K EL+ + G     G  +TLP+VF+  K++G A+ ++ + E G+L ++L G  R +      G  C +CGDV FVPC  C G  KV+ E
Sbjct:  250 KERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVRFVPCETCSGSCKVYYE 384          
BLAST of EY736226 vs. ExPASy Swiss-Prot
Match: GRCR1_HUMAN (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.672e-18
Identity = 54/136 (39.71%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  241 YNNESSI-RLPGTE---DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKEL--QCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVTFVPCWNCIG 630
            +NN + + + P T+   DR+V+Y T LR +R TFE C  VR IF+  RV  +E++++++  Y KEL  +C    +  +LP VFI G ++G A+ + SM E+GEL  +L    R Q    C SCG   F+PC  C G
Sbjct:  120 FNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVCHG 255          
BLAST of EY736226 vs. ExPASy Swiss-Prot
Match: GRCR1_MOUSE (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.326e-17
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
Query:  280 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKEL--QCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVTFVPCWNCIG 630
            DR+V+Y T LR +R TFE C  VR IF+  RV  +E++++++  Y KEL  +C    +  +LP VFI G ++G A+ + SM E+GEL  +L    R Q    C SCG   F+PC  C G
Sbjct:  137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPHECPSCGGFGFLPCSVCHG 255          
BLAST of EY736226 vs. ExPASy Swiss-Prot
Match: GRCR1_DROME (Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 40/119 (33.61%), Postives = 68/119 (57.14%), Query Frame = 1
Query:  283 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVTFVPCWNCIGDPK 639
            ++V+Y TS+  IR T+  C  V+ I R   V  +ERDV M   Y+ E++       V +PQ+++ G+H+G+A+ ++ M E+GEL ++L  +      + C +CG    +PC +C G  K
Sbjct:  306 KVVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVRVPQLYVEGQHIGDAETVERMNESGELRQLLKPYKSMASTYTCQTCGGYRLLPCPSCNGSKK 424          
BLAST of EY736226 vs. ExPASy Swiss-Prot
Match: GRCR2_DROME (Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 42/147 (28.57%), Postives = 79/147 (53.74%), Query Frame = 1
Query:  283 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPRRQPGFVCGSCGDVTFVPCWNCIGDPKVFNEGN----GVPKRGWACAQQGLNPCP 711
            ++V+Y TS+  IR T+  C  V+ I R   +  +ERD+ M   Y++E++     + + +PQ+F+ G+ +G+A++++ + E+GEL ++L  +      + C +CG    +PC  C G  K  +  +     V  +   C + GL  CP
Sbjct:  434 KVVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQLFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCP 580          
The following BLAST results are available for this feature:
BLAST of EY736226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y5986_ARATH5.940e-2640.12Uncharacterized protein At5g39865 OS=Arabidopsis t... [more]
Y3885_ARATH7.261e-2442.22Uncharacterized protein At3g28850 OS=Arabidopsis t... [more]
GRCR1_HUMAN2.672e-1839.71Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR1_MOUSE1.326e-1742.02Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR1_DROME5.572e-1633.61Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR2_DROME4.717e-1528.57Glutaredoxin domain-containing cysteine-rich prote... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-E03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736226 ID=EY736226; Name=EY736226; organism=Citrus sinensis; type=EST; length=868bp
CACGCGTCCGCGAAACTCAATTATGCTTCTCTCAATCGGGCCGTTTCGAG
CAATAAGTTTTACAGTTCGATGGAATCAGTCTTATCTGCTAGCAATTCAT
TCAAAGGTAAGGTCAAGCAACTTCGTAATTTATTTGAGCCCAAAAAATCA
TCCAAAAAAATTAATTTAAACGAACCCGAATCCCCGCAACAGCACCACCT
CATCAAGTTAACAAAACCCGTGAAATCTTTATCTTTGTGTTATAATAATG
AGTCTTCGATTAGATTACCGGGTACTGAGGATCGAATTGTTGTTTATTTA
ACGAGTCTGAGAGGGATTCGAAGGACTTTTGAGGATTGTTATGCGGTTAG
GATGATATTTAGAGGGTTTAGAGTTTGGGTTGACGAGAGAGATGTTTCGA
TGGATTCCGCGTATAAGAAAGAATTACAGTGTGTATTTGGTGGGAAGAAT
GTGACTTTGCCGCAGGTTTTTATCCGGGGAAAGCATGTGGGAAATGCTGA
TGTGTTGAAGAGTATGTATGAAACCGGTGAATTGGCTAGGGTTCTTGATG
GGTTCCCTAGACGGCAACCTGGGTTCGTGTGTGGGAGTTGTGGGGATGTT
ACGTTCGTCCCTTGTTGGAATTGTATTGGGGATCCGAAGGTGTTTAATGA
AGGCAATGGTGTCCCTAAACGGGGCTGGGCATGTGCCCAGCAAGGGTTGA
ATCCTTGCCCTCAGTTGCTGCCCCGCCCCGAGTGCGCCTTCGTGCTCGTA
TGTCCGAATGTTCCCATCGAGTGCCATCACAATCGCGACACCGTGGTGAA
TTGCTGGTCCTAGACGGGCCCGGTGTACACCATAATGAGTCCGCCCCCCG
CGGTGTCCTCCCCCTGTG
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