EY736224

Overview
NameEY736224
Unique NameEY736224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.814e-60
Identity = 111/165 (67.27%), Postives = 136/165 (82.42%), Query Frame = 2
Query:  323 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE 817
            K H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE   FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFE G  K G+    + L K  GV +L++++N MDD  VNWS  RY+E
Sbjct:  201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEE 365          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 4.814e-60
Identity = 111/165 (67.27%), Postives = 136/165 (82.42%), Query Frame = 2
Query:  323 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE 817
            K H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE   FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFE G  K G+    + L K  GV +L++++N MDD  VNWS  RY+E
Sbjct:  201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEE 365          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.814e-60
Identity = 110/165 (66.67%), Postives = 136/165 (82.42%), Query Frame = 2
Query:  323 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE 817
            K H+NVVFIGHVDAGKST GGQI++L+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE   FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFE G  K G+    + L K  GV +L++++N MDD  VNWS  RY+E
Sbjct:   72 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 236          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.814e-60
Identity = 110/165 (66.67%), Postives = 136/165 (82.42%), Query Frame = 2
Query:  323 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE 817
            K H+NVVFIGHVDAGKST GGQI++L+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE   FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFE G  K G+    + L K  GV +L++++N MDD  VNWS  RY+E
Sbjct:   72 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 236          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.288e-60
Identity = 118/194 (60.82%), Postives = 147/194 (75.77%), Query Frame = 2
Query:  245 PEPKVKH--KEVSAVEDAESQQETEGNNKR-HLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE 817
            PE  VK   +E   V  ++S     G  K+ H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE   FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFE G  K G+    + L K  GV  L++++N MDD  V+WS  RY+E
Sbjct:  176 PEESVKEVMEEKEEVRKSKSVSIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEE 369          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.712e-57
Identity = 113/221 (51.13%), Postives = 150/221 (67.87%), Query Frame = 2
Query:  254 KVKHKEVSAVEDAES------QQETEGNN---------KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE-IDPTSHHFKGLGLTCEE 868
            K+K KE  A  +A        +QE E +          K H++++F+GHVDAGKST GG IL+++G VD RT++KYE+EAKD  ++ WY++++MDTN EER  GKT+EVGRA+FETE  R+TILDAPGHK YV  MI GASQAD+G+LVISARKGE+E G  K G+    + L K  GV  L++ +N MDD  VNWSK RYD+ +   S+  K +G   +E
Sbjct:  197 KLKIKEEQAAANASGADSLIKEQEEEVDEGVVNDMFGGKDHMSIIFMGHVDAGKSTMGGNILYMTGSVDKRTVEKYEREAKDAGKQGWYLSWVMDTNREERDDGKTIEVGRAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKLIVTINKMDDPTVNWSKERYDQCVKNLSNFLKAIGYNVKE 417          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.815e-57
Identity = 115/238 (48.32%), Postives = 153/238 (64.29%), Query Frame = 2
Query:  233 QPVHPEPKVKHK-EVSAVEDAESQQETEGNN-----------------------------KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDE-IDPTSHHFKGLG 853
            +PV  E K + K E+  VED +  + T   N                             K H++++F+GHVDAGKST GG +L+L+G VD RTI+KYE+EAKD  R+ WY++++MDTN+EER  GKT+EVG+A+FETE  R+TILDAPGHK YV  MI GASQAD+GVLVISARKGE+E G  + G+    + L K  GV  +++VVN MDD  VNWSK RYD+ +   S+  + +G
Sbjct:  198 KPVQTEEKTEEKSELPKVEDLKISESTHNTNNANVTSADALIKEQEEEVDDEVVNDMFGGKDHVSLIFMGHVDAGKSTMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGVLVISARKGEYETGFERGGQTREHALLAKTQGVNKMVVVVNKMDDPTVNWSKERYDQCVSNVSNFLRAIG 435          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.110e-56
Identity = 110/197 (55.84%), Postives = 142/197 (72.08%), Query Frame = 2
Query:  266 KEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDEIDPTSHHF-KGLG 853
            KE     D E  ++  G  K H++++F+GHVDAGKST GG IL+L+G VD RT++KYE+EAKD  R+ WY++++MDTN+EER  GKT+EVG+A+FET+  R+TILDAPGHK YV  MI GASQAD+G+LVISARKGE+E G  K G+    + L K  GV  +++VVN MDD  VNWSK RY E       F KG+G
Sbjct:  269 KEQEDEVDEEVVKDMFGG-KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVNWSKERYQECTTKLGVFLKGIG 464          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.473e-56
Identity = 109/180 (60.56%), Postives = 136/180 (75.56%), Query Frame = 2
Query:  317 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDEI-DPTSHHFKGLG 853
            +++ HLN+VF+GHVDAGKST  G I+ L+GQVD  T+ KYE+EAK+  RE W  AYIMDTNEEER KGKTVEVGRAHFET   R+TILDAPGH+ YVPNMI GA+QAD+G+LVIS++KGEFE G+ + G+ +  + L K  G+  L++ VN MD+  V WSK RYDEI D  + H K  G
Sbjct:  113 DSREHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFEAGV-EGGQTIEHARLAKMIGIKYLVVFVNKMDEPTVKWSKARYDEITDKLTVHLKKCG 291          
BLAST of EY736224 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.217e-56
Identity = 104/178 (58.43%), Postives = 134/178 (75.28%), Query Frame = 2
Query:  323 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFELGLRKEGRPVNMSCLPKPWGVTNLLLVVN*MDDHPVNWSKGRYDEIDPTSHHF-KGLG 853
            K H++++F+GHVDAGKST GG IL+L+G VD RT++KYE+EAKD  R+ WY++++MDTN+EER  GKT+EVG+A+FET+  R+TILDAPGHK YV  MI GASQAD+G+LVISARKGE+E G  K G+    + L K  GV  +++VVN MDD  V WSK RY E       F KG+G
Sbjct:  290 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDSTVGWSKERYQECTTKLGAFLKGIG 467          
The following BLAST results are available for this feature:
BLAST of EY736224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERF3B_PONAB4.814e-6067.27Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_HUMAN4.814e-6067.27Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3A_MOUSE4.814e-6066.67Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3A_HUMAN4.814e-6066.67Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_MOUSE6.288e-6060.82Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_ZYGRO1.712e-5751.13Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_YEAST3.815e-5748.32Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_CANMA1.110e-5655.84Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_DICDI2.473e-5660.56Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_CANAL4.217e-5658.43Eukaryotic peptide chain release factor GTP-bindin... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-D11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736224 ID=EY736224; Name=EY736224; organism=Citrus sinensis; type=EST; length=870bp
CCACGCGTCCGCACTCGCTTCTTTCACTCGATTAAGGAGGGGAAAAAAAA
GAGAAAGAAGAGAACCGGTAGGTGCCTTCATCACTATGGATATTGAGGAG
GATATCCGCTCATTACAGCTTGACTCCGCAGAAGAGAATAATGGGGTGGT
CAATCCTGGAGATGCAAGGCCAGAAGAAGTTGAGGTGGTGGATAAGATGG
AGGAAGATTCAGAGGAGGTGCAAGCAGTATCCCAGCCTGTTCATCCTGAG
CCTAAAGTGAAACACAAGGAAGTATCTGCGGTGGAAGATGCTGAATCTCA
GCAAGAGACCGAAGGAAATAATAAGCGACACTTGAATGTTGTATTTATTG
GTCATGTTGATGCTGGAAAGTCTACCACTGGAGGCCAGATACTTTTTCTT
AGTGGCCAGGTCGATGACCGTACAATTCAAAAATATGAGAAAGAAGCAAA
GGATAAAAGTAGAGAAAGCTGGTATATGGCGTATATTATGGACACTAATG
AAGAGGAGAGGATCAAGGGTAAAACAGTAGAAGTTGGAAGAGCTCACTTT
GAAACTGAGACTACTAGATTTACAATTTTGGATGCGCCGGGTCACAAGAG
TTATGTCCCTAATATGATTAGTGGGGCATCTCAAGCTGATATTGGTGTAC
TGGTAATCTCTGCTCGAAAAGGAGAGTTTGAACTGGGTTTGAGAAAGGAG
GGCAGACCCGTGAACATGTCATGCTTGCCAAAACCTTGGGGCGTGACTAA
CCTGCTTCTTGTTGTCAATTAAATGGATGACCACCCTGTGAACTGGTCCA
AGGGAAGGTATGATGAGATCGATCCAACATCACACCATTTTAAAGGGCTC
GGGCTCACATGTGAAGAAAG
back to top