EY736220

Overview
NameEY736220
Unique NameEY736220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length255
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT1_BOVIN (Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.938e-19
Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 3
Query:   12 RGRYRESDDYAHGSQVVVA-DTPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            +G  RES+    G  +     TP G++GL +CYD+RFPEL   L  AGAE++T PSAF +VTG AHW+VL+RARAIETQCY+
Sbjct:  173 QGPMRESNSTIPGPSLESPISTPAGKIGLAICYDMRFPELSLALVQAGAEILTYPSAFGSVTGPAHWEVLLRARAIETQCYV 254          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT1_HUMAN (Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.531e-19
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 3
Query:   72 TPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            TP G++GL VCYD+RFPEL   L  AGAE++T PSAF ++TG AHW+VL+RARAIETQCY+
Sbjct:  193 TPAGKIGLAVCYDMRFPELSLALAQAGAEILTYPSAFGSITGPAHWEVLLRARAIETQCYV 253          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT1_RAT (Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.638e-19
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 3
Query:   72 TPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            TP G++GL +CYD+RFPEL  +L  AGAE++T PSAF +VTG AHW+VL+RARAIE+QCY+
Sbjct:  158 TPAGKVGLAICYDMRFPELSLKLAQAGAEILTYPSAFGSVTGPAHWEVLLRARAIESQCYV 218          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 3
Query:   18 RYRESDDYAHGSQVVV-ADTPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            R  ES+    G++++   DTP+GRLGL++CYD+RFPEL    R  GA+L++ PSAFT  TG AHW+ L+RARAIE QCY+
Sbjct:  140 RLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYV 219          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT1_DICDI (Nitrilase homolog 1 OS=Dictyostelium discoideum GN=nit1-1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 3
Query:   18 RYRESDDYAHGSQVVVADTPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            +  ES     G+ +VV D+PVG+LGL++CYDLRFPELY  LR   A+++  PSAF   TG AHW  L++ARAIE Q Y+
Sbjct:  144 KMNESKVVKGGNDLVVCDSPVGKLGLSICYDLRFPELYLSLRRMDAQILLVPSAFMKSTGEAHWKPLLQARAIENQTYV 222          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT1_MOUSE (Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 3
Query:   72 TPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            TP G++GL +CYD+RFPEL  +L  AGAE++T  SAF +VTG AHW+VL+RARAIE+QCY+
Sbjct:  189 TPAGKVGLAICYDMRFPELSLKLAQAGAEILTYSSAFGSVTGPAHWEVLLRARAIESQCYV 249          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NFT1_DROME (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 3
Query:   18 RYRESDDYAHGSQVV-VADTPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            R RESD    G  +     TPVG++GL +CYDLRF E    LR  GA L+T PSAFT  TG AHW++L+RARAIETQC++
Sbjct:  154 RLRESDTVTPGYCLERPVSTPVGQIGLQICYDLRFAEPAVLLRKLGANLLTYPSAFTYATGKAHWEILLRARAIETQCFV 233          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT2_SCHPO (Probable hydrolase nit2 OS=Schizosaccharomyces pombe GN=nit2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.277e-17
Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 3
Query:   24 RESDDYAHGSQVVV-ADTPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            +ES+    G  ++    TP+G++G  +C+D+RFPE   +LR  GA +IT PSAFT  TGAAHW+VL+RARA+++QCY+
Sbjct:  129 KESNTTLRGEAILPPCKTPLGKVGSAICFDIRFPEQAIKLRNMGAHIITYPSAFTEKTGAAHWEVLLRARALDSQCYV 206          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: NIT2_YEAST (Probable hydrolase NIT2 OS=Saccharomyces cerevisiae GN=NIT2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.001e-17
Identity = 35/64 (54.69%), Postives = 51/64 (79.69%), Query Frame = 3
Query:   63 VADTPVGRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            + ++P+G+LG  +CYD+RFPE   +LR+ GAE++  PSAFT  TG AHW++L RARA++TQCY+
Sbjct:  156 IIESPLGKLGSAICYDIRFPEFSLKLRSMGAEILCFPSAFTIKTGEAHWELLGRARAVDTQCYV 219          
BLAST of EY736220 vs. ExPASy Swiss-Prot
Match: Y601_SYNY3 (UPF0012 hydrolase sll0601 OS=Synechocystis sp. (strain PCC 6803) GN=sll0601 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.451e-15
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 3
Query:   81 GRLGLTVCYDLRFPELYSELRAAGAELITAPSAFTAVTGAAHWDVLIRARAIETQCYL 254
            G LGL++CYD+RFPELY  L   GA+++  P+AFTA TG  HW VL++ARAIE  CY+
Sbjct:  151 GNLGLSICYDVRFPELYRYLSRQGADVLFVPAAFTAYTGKDHWQVLLQARAIENTCYV 208          
The following BLAST results are available for this feature:
BLAST of EY736220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NIT1_BOVIN1.938e-1956.10Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=... [more]
NIT1_HUMAN2.531e-1967.21Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 S... [more]
NIT1_RAT5.638e-1965.57Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 P... [more]
NFT1_CAEEL9.617e-1955.00Nitrilase and fragile histidine triad fusion prote... [more]
NIT1_DICDI2.798e-1853.16Nitrilase homolog 1 OS=Dictyostelium discoideum GN... [more]
NIT1_MOUSE4.773e-1863.93Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 S... [more]
NFT1_DROME1.063e-1756.25Nitrilase and fragile histidine triad fusion prote... [more]
NIT2_SCHPO5.277e-1750.00Probable hydrolase nit2 OS=Schizosaccharomyces pom... [more]
NIT2_YEAST9.001e-1754.69Probable hydrolase NIT2 OS=Saccharomyces cerevisia... [more]
Y601_SYNY36.451e-1558.62UPF0012 hydrolase sll0601 OS=Synechocystis sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-D07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736220 ID=EY736220; Name=EY736220; organism=Citrus sinensis; type=EST; length=255bp
TGGCTGATGCCCGGGGTCGTTATCGCGAATCCGATGACTATGCTCATGGT
AGCCAGGTGGTGGTGGCGGATACGCCGGTCGGCCGCCTGGGGCTGACAGT
GTGTTACGACTTGCGTTTTCCGGAGCTTTACAGCGAATTGCGCGCGGCGG
GTGCTGAACTGATTACCGCACCCTCCGCCTTTACGGCGGTGACGGGTGCC
GCGCACTGGGATGTGCTGATTCGTGCCCGGGCCATCGAGACCCAGTGCTA
CCTGC
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