EY736219

Overview
NameEY736219
Unique NameEY736219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736219 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.817e-59
Identity = 118/174 (67.82%), Postives = 136/174 (78.16%), Query Frame = 1
Query:  193 CTSQSNNPIPSTNEPSKVQELYVYEINELDRGSPAYLRLSKKFFINSLGDLVPFSNKLYSGDLQKRVGITAGICILIQHKP-MKGDRYEAVYSFYFGDYGHISVQGSYLTYKDTCLAVTGGSGIFEGVSGQVKLKQLVFPFKLFYTFYLKGI-KDLPGELMGKPVRPSPFVHQA 708
            C+S SN+     + P+K+QEL VYE NE DR SPA L+L KK     LGDLVPF+NKLY+GDL KR+GITAG+C+LIQH P  KGDR+EA YSFYFGDYGHISVQG YLTY+DT LA+TGGSG+FEG  GQVKL+QLV+P KLFYTFYLKG+  DLP EL GK V PS  V  A
Sbjct:   68 CSSSSND----YSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPA 237          
BLAST of EY736219 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.376e-58
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 1
Query:  229 NEPSKVQELYVYEINELDRGSPAYLRLSKKFFINSLGDLVPFSNKLYSGDLQKRVGITAGICILIQHKPMK-GDRYEAVYSFYFGDYGHISVQGSYLTYKDTCLAVTGGSGIFEGVSGQVKLKQLVFPFKLFYTFYLKGI-KDLPGELMGKPVRPSPFVHQA 708
            + PSK+QEL VYE+NE DR SPA L+L KK     LGDLVPF+NKLY+GDL+KRVGITAG+C+LIQH P K GDR+EA YSFYFGDYGH+SVQG YLTY+DT LAVTGGSGIFEG  GQVKL+QLV+P KLFYTFYLKG+  DLP EL G  V PS  V  A
Sbjct:   80 SRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPA 241          
BLAST of EY736219 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.704e-57
Identity = 117/185 (63.24%), Postives = 141/185 (76.22%), Query Frame = 1
Query:  166 SSVPKRSFTCTSQSNNPIPSTNEP--SKVQELYVYEINELDRGSPAYLRLSKKFFINSLGDLVPFSNKLYSGDLQKRVGITAGICILIQHKPMK-GDRYEAVYSFYFGDYGHISVQGSYLTYKDTCLAVTGGSGIFEGVSGQVKLKQLVFPFKLFYTFYLKGI-KDLPGELMGKPVRPSPFVHQA 708
            S  PK+  T T   +  + +T  P  SKVQEL VYEIN+LDR SP  L+ +  F    LGDLVPF+NKLY+GDL+KRVGITAG+C++I+H P K GDR+EA YSFYFGDYGH+SVQG YLTY+D+ LA+TGG+GIFEG  GQVKL+QLV+P KLFYTFYLKG+  DLP EL+G PV PS  V  A
Sbjct:   54 SFTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFG-LGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPA 237          
BLAST of EY736219 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.033e-55
Identity = 114/184 (61.96%), Postives = 138/184 (75.00%), Query Frame = 1
Query:  166 SSVPKRSFTCT-SQSNNPIPSTNEPSKVQELYVYEINELDRGSPAYLRLSKKFFINSLGDLVPFSNKLYSGDLQKRVGITAGICILIQHKP-MKGDRYEAVYSFYFGDYGHISVQGSYLTYKDTCLAVTGGSGIFEGVSGQVKLKQLVFPFKLFYTFYLKGI-KDLPGELMGKPVRPSPFVHQA 708
            S   K++ T + + S N       PSKVQEL VYEINELDR SP  L+ +       LGDLVPF+NKLY+GDL+KRVGITAG+C++I+H P  KG+R+EA YSFYFGDYGH+SVQG YLTY+D+ LA+TGG+GIFEG  GQVKL+QLV+P KLFYTFYLKG+  DLP EL G PV PS  +  A
Sbjct:   54 SFTAKKNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFG-LGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPA 236          
The following BLAST results are available for this feature:
BLAST of EY736219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AOC4_ARATH8.817e-5967.82Allene oxide cyclase 4, chloroplastic OS=Arabidops... [more]
AOC3_ARATH4.376e-5871.60Allene oxide cyclase 3, chloroplastic OS=Arabidops... [more]
AOC1_ARATH3.704e-5763.24Allene oxide cyclase 1, chloroplastic OS=Arabidops... [more]
AOC2_ARATH2.033e-5561.96Allene oxide cyclase 2, chloroplastic OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-D05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736219 ID=EY736219; Name=EY736219; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGTGCTTCAAGAATCGTTATCTCTTCTTCTTCTTCTTTTGT
CAAACAAGTCGATAATTCTTGTCCGGCCCAGTCATCATTTATGCAATTCA
AGCTCACATACCCAAGGTCTCTGACTCATCAAAGTTTCAATCTCCACGCC
ACCACACACTGCATCTCCTCAGTACCCAAAAGATCTTTCACTTGCACGAG
CCAATCCAATAACCCGATCCCATCTACAAATGAACCTTCCAAAGTTCAAG
AATTGTATGTTTATGAGATCAACGAGCTAGATCGTGGCAGCCCAGCCTAT
CTCCGGTTGAGCAAGAAATTTTTCATCAATTCACTCGGTGATCTTGTCCC
TTTTAGCAACAAATTATATAGCGGAGACTTGCAAAAGCGAGTGGGAATTA
CAGCAGGAATTTGCATTTTGATCCAGCACAAGCCAATGAAAGGTGACAGA
TACGAAGCCGTATACAGCTTCTACTTCGGAGACTACGGTCACATATCGGT
GCAGGGGTCTTATTTGACATACAAGGACACGTGTCTCGCTGTGACTGGAG
GGTCAGGGATCTTTGAAGGAGTGAGTGGGCAGGTTAAGCTGAAGCAACTT
GTGTTTCCATTTAAGCTGTTCTATACTTTTTATTTGAAGGGCATTAAGGA
TCTGCCGGGAGAGCTTATGGGGAAGCCCGTGAGGCCCAGCCCTTTTGTTC
ACCAAGCCCTATGGCTAAGGCTTGTAAGCCTGGTGCCACGTTGCTAATTT
ACTGATTACTAGGATTTCAATTAATATTTAATGAGTGCGTGTGATGATTA
AGAAACATACGTATGGCTGTAATTTTATCTATTCTGAATGGATGGGAAAT
GC
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