EY736218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736218 vs. ExPASy Swiss-Prot
Match: SKIP2_ARATH (F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 6.150e-75 Identity = 138/224 (61.61%), Postives = 173/224 (77.23%), Query Frame = 3 Query: 135 MGQTPSTAIDPSDR---FNILSPAIVSN-DGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGADPI--PAGSRCRFVREVHLPE 788 MGQ PS+ + + R + SP IV+ + + + +D RDFTGDLPD+CLA++FQFLG+GDRKRCSLVCKRWL VDG SR+RLSL+A+ EI S L S+F+RFDSVTKLALRCDRKS+SL D+AL +IS+RC LTR+KLRGCREITD GM FA+NCK LKKLS GSC FGAK +N++L+HC+LLEELS+KRLRGIH+ A+ I P + +R + L E Sbjct: 1 MGQAPSSTAESNGRELDLRLWSPVIVAGGESMAVGNVVD--RDFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFDSVTKLALRCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICLKE 222 HSP 2 Score: 36.1946 bits (82), Expect = 6.150e-75 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 766 SVKSICLKGLVNGQSLEPLVIAAKKLKLWK 855 S++SICLK LVNGQ EPL+ + LK K Sbjct: 214 SLRSICLKELVNGQVFEPLLATTRTLKTLK 243
BLAST of EY736218 vs. ExPASy Swiss-Prot
Match: FBL16_ARATH (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 4.219e-69 Identity = 132/221 (59.73%), Postives = 170/221 (76.92%), Query Frame = 3 Query: 135 MGQTPSTAIDPSDRFNIL---SPAIVSNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGADPI----PAGSRCRFVREV 776 MGQ PS+ +P+ R L SP + + + F D DFT +LPDDCLA+IFQFL +GDRKRCSLV KRWL VDG +R+RLSL+A+SEIL LP +F+RFDSVTKLALRCDR+S SL D+AL ++S+RC L R+KLRGCREITD GM +FA+NCK+L+KLSCGSC FGAK IN++L+HC++LEELS+KR+RG+H+ A+PI A R F++E+ Sbjct: 1 MGQAPSSPAEPNVRDTSLCLWSPEFLDCESIGFEDG---DYDFTANLPDDCLAHIFQFLSAGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLSLSASLRSVFLKEL 218
BLAST of EY736218 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.573e-66 Identity = 108/159 (67.92%), Postives = 136/159 (85.53%), Query Frame = 3 Query: 249 DFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHD 725 D+T LPD+CLA +FQFL SG+RKRC+LVC+RW+ V+G +RYRLSL+A+S++++S+PS+FSRFDSVTKL+L+CDR+S+S+ D+ALV ISLRC+ L RLKLR CRE+TD GM AFA+NCK LK SCGSC FGAK + +VLDHC LEELSIKRLRG D Sbjct: 38 DYTSSLPDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDSVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTD 196 HSP 2 Score: 39.2762 bits (90), Expect = 3.573e-66 Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1 Query: 757 AALSVKSICLKGLVNGQSLEPLVIAAKKLKLWK 855 AA S+KSICLK L NGQ P+++ AK LK K Sbjct: 207 AASSLKSICLKELYNGQCFGPVIVGAKNLKSLK 239
BLAST of EY736218 vs. ExPASy Swiss-Prot
Match: FBL8_ARATH (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.902e-53 Identity = 101/184 (54.89%), Postives = 139/184 (75.54%), Query Frame = 3 Query: 237 DKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGADPIPAGSRCRFVREVHLPE 788 D+ D+ +LPD+CL+ IFQ L D KRCSLVC+RWL ++G R+RLSL AQS+++S +PS+F+RFDSVTKL LR DR+S+ + D+A V+IS+RC+ LTRLKLRGC EI+D G++ F +NC++LKK+S GSC FG K +N++L+ C LEELS+KRLRGI GA+ I G ++ + L E Sbjct: 68 DEPYDYISNLPDECLSLIFQSLTCADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLFTRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAGSLKVICLKE 251 The following BLAST results are available for this feature:
BLAST of EY736218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736218 ID=EY736218; Name=EY736218; organism=Citrus sinensis; type=EST; length=856bpback to top |