EY736196

Overview
NameEY736196
Unique NameEY736196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736196 vs. ExPASy Swiss-Prot
Match: ASD1_ARATH (Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.876e-87
Identity = 150/193 (77.72%), Postives = 166/193 (86.01%), Query Frame = 2
Query:   11 EALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRTYPDIGIISNCDGSSSPLDHKADFYDFHIYTSANDLFSKTHKFDHTSRTGPKAFVSEYAVHGNDAGNGNLLXALAEGGFLIGLEKNSDVVAMASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRE 589
            EALDGIEFARGD NSTWGSVRA MG  +PF+L+YVA+GNEDCGK  YRGNY+ FYDAIK+ YPDI IISNCDGSS PLDH AD+YD+HIYTSA++LFS  H+FD TSR GPKAFVSEYAV G DAG G+LL +LAE  FLIGLEKNSD+V MASYAPLFVN NDR W PDAIVFNS+ LYGTPSYWVQ+FF E
Sbjct:  349 EALDGIEFARGDANSTWGSVRAKMGRQEPFELKYVAIGNEDCGKTYYRGNYIVFYDAIKKAYPDIKIISNCDGSSHPLDHPADYYDYHIYTSASNLFSMYHQFDRTSRKGPKAFVSEYAVTGKDAGTGSLLASLAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAE 541          
BLAST of EY736196 vs. ExPASy Swiss-Prot
Match: ASD2_ARATH (Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thaliana GN=ASD2 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.862e-85
Identity = 147/193 (76.17%), Postives = 164/193 (84.97%), Query Frame = 2
Query:   11 EALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRTYPDIGIISNCDGSSSPLDHKADFYDFHIYTSANDLFSKTHKFDHTSRTGPKAFVSEYAVHGNDAGNGNLLXALAEGGFLIGLEKNSDVVAMASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFFRE 589
            EA+DGIEFARGD NSTWGSVRAAMGHP+PF+L+YVAVGNEDC K  YRGNYL+FY+AIK+ YPDI IISNCD S+ PLDH AD++D+HIYT A DLFSK+H FD+T R GPKAFVSEYAV+  DA NGNLL AL E  FL+GLEKNSD+V M SYAPLFVN NDR W PDAIVFNS+ LYGTPSYWVQ FF E
Sbjct:  348 EAIDGIEFARGDSNSTWGSVRAAMGHPEPFELKYVAVGNEDCFKSYYRGNYLEFYNAIKKAYPDIKIISNCDASAKPLDHPADYFDYHIYTLARDLFSKSHDFDNTPRNGPKAFVSEYAVNKADAKNGNLLAALGEAAFLLGLEKNSDIVEMVSYAPLFVNTNDRRWIPDAIVFNSSHLYGTPSYWVQHFFTE 540          
BLAST of EY736196 vs. ExPASy Swiss-Prot
Match: ABF1_STRCX (Alpha-N-arabinofuranosidase 1 OS=Streptomyces chartreusis PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.072e-32
Identity = 79/201 (39.30%), Postives = 107/201 (53.23%), Query Frame = 2
Query:   11 EALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRTYPDIGIISNC--DGSSSPLD--------HKADFYDFHIYTSANDLFSKTHKFDHTSRTGPKAFVSEYAVHGNDAGNGNLLXALAEGGFLIGLEKNSDVVAMASYAPLFVNANDRWWTPDAIVFNSAQLYGTPSYWVQQFF 583
            + LD IEFA G   S WG VRA MGHP PF L ++ VGNE+     +   + +F  AI+  YPDI ++SN   D + +  D           +  D H Y S N       ++D   R GPK F+ EYA  GN   NG     L+E  F+ GLE+N+DVV +ASYAPL  N +   W PD + FN+   + + +Y VQ+ F
Sbjct:  341 DTLDLIEFANGPATSKWGKVRAEMGHPRPFRLTHLEVGNEENLPDEFFDRFKQFRAAIEAEYPDITVVSNSGPDDAGTTFDTAWKLNREANVEMVDEHYYNSPNWFLQNNDRYDSYDRGGPKVFLGEYASQGNAWKNG-----LSEAAFMTGLERNADVVKLASYAPLLANEDYVQWRPDLVWFNNRASWNSANYEVQKLF 536          
BLAST of EY736196 vs. ExPASy Swiss-Prot
Match: ABFA_ASPNG (Alpha-N-arabinofuranosidase A OS=Aspergillus niger GN=abfA PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26
Identity = 72/201 (35.82%), Postives = 117/201 (58.21%), Query Frame = 2
Query:   11 EALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDC---GKKNYRGNYLKFYDAIKRTYPDIGIISN-----CDGSSSPLDHKADFYDFHIYTSANDLFSKTHKFDHTSRTGPKAFVSEYAVHGNDAGNGNLLXALAEGGFLIGLEKNSDVVAMASYAPLFVNANDRWWTPDAIVFNSA--QLYGTPSYWVQQFF 583
            + L+ +E+  GD ++T+G+ RAA G  +P++L  V +GNED    G ++Y   +  FYDAI   YPD+ +I++     C   S P   +  + D+H Y++ + L  + + FD+ +R+ P  F+ EY+    D  N  +  ++AE  F+IG E+NSDVV MA+YAPL    N   WTPD I +  +   ++ + SY+VQ+ F
Sbjct:  329 DVLNELEYILGDTSTTYGAWRAANGQEEPWNLTMVEIGNEDMLGGGCESYAERFTAFYDAIHAAYPDLILIASTSEADCLPESMP---EGSWVDYHDYSTPDGLVGQFNYFDNLNRSVPY-FIGEYSRWEIDWPN--MKGSVAEAVFMIGFERNSDVVKMAAYAPLLQLINSTQWTPDLIGYTQSPGDIFLSTSYYVQEMF 523          
The following BLAST results are available for this feature:
BLAST of EY736196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASD1_ARATH9.876e-8777.72Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thali... [more]
ASD2_ARATH1.862e-8576.17Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thali... [more]
ABF1_STRCX1.072e-3239.30Alpha-N-arabinofuranosidase 1 OS=Streptomyces char... [more]
ABFA_ASPNG3.341e-2635.82Alpha-N-arabinofuranosidase A OS=Aspergillus niger... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-B03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736196 ID=EY736196; Name=EY736196; organism=Citrus sinensis; type=EST; length=849bp
CACGCGTCCGGAAGCCCTTGATGGTATTGAGTTTGCAAGAGGTGATCCAA
ACTCTACATGGGGTTCTGTACGAGCTGCAATGGGACATCCTGATCCTTTT
GACTTGAGATATGTTGCTGTTGGGAATGAAGATTGTGGGAAAAAGAATTA
CAGAGGAAACTACCTCAAGTTCTATGATGCTATAAAACGTACCTACCCAG
ACATTGGAATAATCTCAAACTGTGACGGATCTTCTAGTCCATTGGATCAT
AAAGCTGATTTTTATGATTTTCATATTTATACATCTGCCAACGACTTGTT
TTCAAAGACTCATAAGTTTGATCATACATCACGCACTGGTCCCAAGGCCT
TCGTTAGTGAATATGCTGTGCACGGAAATGATGCTGGCAATGGAAATCTT
TTANCAGCACTTGCTGAAGGTGGATTCCTTATTGGGCTGGAAAAAAACAG
TGATGTTGTTGCAATGGCAAGCTATGCACCACTTTTTGTAAATGCCAATG
ACAGATGGTGGACTCCGGATGCAATTGTCTTCAACTCTGCACAGCTCTAT
GGAACGCCTAGCTACTGGGTGCAACAATTTTTCAGAGAATCAAGTGGGGC
AACTCTTCTCAATGCAACCCTGCTAACAAATTCCTCTAGTTCAATTGTCG
CATCTGCAATTTNCTTGGGAAGACTCAGAGAATGCCAAAAGTTTCCTGAG
AATAAAGGTTGTGAACCTCAGGAGCAATTCAGTAATCTCAAAGTTTCTGT
GGATGGGGTTGGGGGCCAATCCCTAAAATTTCTGGATCAATAAAGCTCAG
CTCACGTCTAGCAGTTGAAGGATGAGAATCCTTCCGGGGCCAACAGGTG
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