EY736190

Overview
NameEY736190
Unique NameEY736190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736190 vs. ExPASy Swiss-Prot
Match: REG9_PYRAB (Uncharacterized HTH-type transcriptional regulator PYRAB16920 OS=Pyrococcus abyssi GN=PYRAB16920 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = -2
Query:   30 MNERLDAIDRQLLSLLQANAREPAAILARKLGLARTTVVARIARLERESIVAGYGVRLGRLLEEAAVRAYCFISVLPK---TPAAVIRELEKMPEVEEVSSVSGPYDYLIFLRCETHEQLDEL-LDRIGLIEGVNR 425
            M E LD +DR+LL  L+ NARE  A L++KLG+ RTTV  RI RL  E I+  + ++           A+  I   P    T   V  ++ K+P V EV  ++G +D L+ +R    E++  + +D++  I GV +
Sbjct:    1 MAEILDKVDRRLLEELKINARENIATLSKKLGIPRTTVHYRIKRLVEEGIIERFTIKPNYKKLNLGTTAFILIRYDPDSGLTQRQVAEQIAKIPGVYEVHIIAGEWDLLLKVRASNAEEVGRIVIDKLREIRGVGQ 136          
BLAST of EY736190 vs. ExPASy Swiss-Prot
Match: REG9_PYRHO (Uncharacterized HTH-type transcriptional regulator PH1916 OS=Pyrococcus horikoshii GN=PH1916 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.737e-12
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = -2
Query:   30 MNERLDAIDRQLLSLLQANAREPAAILARKLGLARTTVVARIARLERESIVAGYGVRLGRLLEEAAVRAYCFISVLPK---TPAAVIRELEKMPEVEEVSSVSGPYDYLIFLRCETHEQLDEL-LDRIGLIEGVNR 425
            M E LD +DR+LL  L+ NARE  A L++KLG+ RTTV  RI RL  E I+  + ++           A+  I   P    T   V  ++ ++P V EV  V+G +D L+ +R    E++  + +D++  I GV +
Sbjct:    1 MPEILDKVDRRLLEELKNNARENIATLSKKLGIPRTTVHYRIKRLVEEGIIEKFTIKPNYKKLNLGTTAFILIRYDPDSGLTQREVAEQIARIPGVYEVHLVAGEWDLLLKVRASNAEEIGRIVIDKLREIRGVGQ 136          
BLAST of EY736190 vs. ExPASy Swiss-Prot
Match: REG6_PYRFU (Uncharacterized HTH-type transcriptional regulator PF1543 OS=Pyrococcus furiosus GN=PF1543 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 38/126 (30.16%), Postives = 67/126 (53.17%), Query Frame = -2
Query:   36 LDAIDRQLLSLLQANAREPAAILARKLGLARTTVVARIARLERESIVAGYGVRLGRLLEEAAVRAYCFISVLPKTPAAVIRELEKMPEVEEVSSVSGPYDYLIFLRCETHEQLDELLDRIGLIEGV 413
            LD ID++++ +LQ + + P   +++  GLA +T+  RI RL    ++  +   +        + A+  I V     + V  +L K PE+ EV   +G YD ++ +R +  E+L+  LD +G IEGV
Sbjct:    5 LDDIDKKIIEILQKDGKVPLREISKITGLAESTIHERIKRLRESGVIKKFTAVVNPEALGYNILAFILIKVKAGKYSEVASKLVKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDMVGSIEGV 130          
BLAST of EY736190 vs. ExPASy Swiss-Prot
Match: REG9_PYRFU (Uncharacterized HTH-type transcriptional regulator PF0250 OS=Pyrococcus furiosus GN=PF0250 PE=4 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = -2
Query:   30 MNERLDAIDRQLLSLLQANAREPAAILARKLGLARTTVVARIARLERESIVAGYGVRLGRLLEEAAVRAYCFISVLPK---TPAAVIRELEKMPEVEEVSSVSGPYDYLIFLRCETHEQLDEL-LDRIGLIEGVNR 425
            M E LD  D+ LL  L+ NARE  A L++KLG+ RTTV  RI RL  E I+  + ++           A+  I   P    T   V  ++ K+P V EV  V+G +D L+ +R    E++ ++ ++++  I+GV +
Sbjct:    1 MAELLDRTDKMLLEELKKNARENIAALSKKLGIPRTTVHYRIKRLLEEGIIEKFTIKPNYKKLNLGTTAFVLIRYDPDSGLTQKEVAEQIAKIPGVYEVHIVAGEWDILLKVRAANAEEVGKIVIEKLREIKGVGQ 136          
The following BLAST results are available for this feature:
BLAST of EY736190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
REG9_PYRAB3.363e-1234.56Uncharacterized HTH-type transcriptional regulator... [more]
REG9_PYRHO5.737e-1234.56Uncharacterized HTH-type transcriptional regulator... [more]
REG6_PYRFU2.180e-1130.16Uncharacterized HTH-type transcriptional regulator... [more]
REG9_PYRFU4.856e-1133.82Uncharacterized HTH-type transcriptional regulator... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-A07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736190 ID=EY736190; Name=EY736190; organism=Citrus sinensis; type=EST; length=813bp
CTTGCGGCTGAGCACGATGGAGGTCTGCGTCTGTTCACGCCTTCGATCAG
GCCGATGCGGTCGAGCAGCTCGTCGAGCTGTTCATGGGTTTCGCAGCGCA
GGAAGATCAGGTAGTCATACGGGCCGCTGACCGAGGACACTTCTTCGACC
TCGGGCATTTTCTCGAGCTCGCGGATGACCGCCGCCGGCGTCTTGGGCAG
GACGCTGATGAAGCAGTAGGCGCGCACCGCGGCCTCTTCGAGCAGGCGGC
CGAGCCGCACGCCGTAGCCCGCCACGATGCTCTCGCGCTCGAGCCGGGCG
ATGCGCGCCACCACGGTGGTGCGCGCCAGCCCCAGCTTGCGCGCCAGGAT
GGCGGCGGGTTCGCGGGCGTTGGCCTGCAGCAGGCTGAGCAGTTGCCGGT
CGATGGCGTCTAGGCGTTCGTTCATGCGCCCGACCATACAGGGGCGGCGC
GGCGCAAGTCAATGCGCGGCTCAGCCGTCGGATTCGGGCGGAATGCCGCC
TTGATAGACGCGGCCGTCGAAGGCAAAGCGGGTGATGCTCCGGGAAGGCG
CGTCGAAGACCCGGTCGCGGCGCGCGGCGTCCGCCTCGCGCGCCGATGCC
AGCGTGAAGCGGCAGAGGTCGGCGGCGCTGTCGTANCGGGCCTCGCGCAC
CAGGTCGCTGACGCCGAACTCCTGCACATGATGGGCGAACTCGCGCAGCT
GCTCCATTTCGTGGAAGGGCCCCGGTCGCTGACAGCCCGATGCCGACGTT
GGGGTCTCCGAGGACGGGGGGCGGCGCCGCCGGACGGGGCGGGGGGCCGG
CCCCCTCGCCCCG
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