EY736146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.862e-57 Identity = 112/211 (53.08%), Postives = 127/211 (60.19%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTG-----INPSKARFLHSKKSLTDLKLPLVKC-SGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 MASWVLSECGL+PLP ++P+PRTG NP+K RF S TDL C S R++NW L+VSAPLRV +E E+ FDPGAPPPFKL+DIR AIPKHCWVKDPW+SM Y PLYW A TMFWALFVLGHDCGHGSFSND KLNSVVGH++HSS+L PY Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRF-----SRTDLGNGSSFCLSSGILREKNWALRVSAPLRVLQVEEEEENKEGERVINGGEE----------FDPGAPPPFKLSDIREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPKLNSVVGHILHSSILVPY 196 HSP 2 Score: 32.7278 bits (73), Expect = 3.862e-57 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVENDE+W P+SEK Sbjct: 208 QNHGHVENDESWHPLSEK 225
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.116e-56 Identity = 111/208 (53.37%), Postives = 127/208 (61.06%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 MA+W +CGLKPL + PRPRTG + S+ FL + K + K ++C+ R+RNWGLKVSAPLRVA +E E FDPGAPPPF LADIRAAIPKHCWVKDPW+SMSY PLYWAA GTMFWALFVLGHDCGHGSFSN+ KLNSVVGHL+HSS+L PY Sbjct: 1 MATWYHQKCGLKPLAPVIPRPRTGAALSSTSRVEFLDTNKVVAGPKFQPLRCN---LRERNWGLKVSAPLRVASIEEEQKSVDLTNGTNGVEHEKLPE-----FDPGAPPPFNLADIRAAIPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSKLNSVVGHLLHSSILVPY 200 HSP 2 Score: 28.8758 bits (63), Expect = 1.116e-56 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 715 GHVENDEAWAPVSEK 759 GH ENDE+W P+ EK Sbjct: 215 GHAENDESWHPLPEK 229
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 4.893e-51 Identity = 104/209 (49.76%), Postives = 117/209 (55.98%), Query Frame = 3 Query: 60 ASWVLSECGLKPLPHIFPRPRTGI-----NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 A WVLSECGL+PLP I+ RPR G N K R L KS +L S S+ NW L V+ P+ V+ + GED FD GAPPPF LADIRAAIPKHCWVK+PW+SMSY PLYW GTMFWALFVLGHDCGHGSFSN+ KLNSVVGHL+HSS+L PY Sbjct: 3 AGWVLSECGLRPLPRIYSRPRIGFTSKTTNLLKLRELPDSKSY-NLCSSFKVSSWSNSKQSNWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEF----FDAGAPPPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPY 206 HSP 2 Score: 32.7278 bits (73), Expect = 4.893e-51 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVENDE+W P+SEK Sbjct: 218 QNHGHVENDESWHPLSEK 235
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 6.929e-50 Identity = 108/215 (50.23%), Postives = 121/215 (56.28%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTGI--NPSKARFLHSKKSLTDLKLPLVKCSGDFSRD---RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 MA+ VLSECG++PLP I+ PR+ N +K R S S PL G SRD RNW L VS PL +PLE ++ FDPGAPPPF LADIRAAIPKHCWVK+PWKS+SY PLYW A GTMFWALFVLGHDCGHGSFSND KLNSVVGHL+HSS+L PY Sbjct: 1 MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPL--SFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQR---------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPY 192 HSP 2 Score: 32.7278 bits (73), Expect = 6.929e-50 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVENDE+W P+SEK Sbjct: 204 QNHGHVENDESWHPMSEK 221
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 8.863e-47 Identity = 96/205 (46.83%), Postives = 108/205 (52.68%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 MAS VLSECG +PLP +P+ T + L L G +S+ RNW L V+ PL E+ FDPGAPPPF LADIRAAIPKHCWVK+PW SMSY PLYW A GTMFWALFVLGHDCGHGSFSND +LNSV GHL+HSS+L PY Sbjct: 1 MASSVLSECGFRPLPRFYPKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPY 185 HSP 2 Score: 28.8758 bits (63), Expect = 8.863e-47 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSE 756 + GHVENDE+W P+ E Sbjct: 197 QNHGHVENDESWHPLPE 213
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.995e-42 Identity = 83/154 (53.90%), Postives = 89/154 (57.79%), Query Frame = 3 Query: 225 RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 RNW L V+ PL V P+E E FDPGAPPPF LADIRAAIPKHCWVK+PWKSMSY PLYW A GTMFWALFVLGHDCGHGSFSND +LNSVVGHL+HSS+L PY Sbjct: 17 RNWALNVTTPLTVDSSSSPPIEEEPKTQR--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPY 150 HSP 2 Score: 32.7278 bits (73), Expect = 5.995e-42 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVENDE+W P+SEK Sbjct: 162 QNHGHVENDESWHPMSEK 179
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.948e-35 Identity = 64/105 (60.95%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 FDPGAPPPFK+ADIRAAIPKHCW K +S+SY PLYW A GTMFWALFVLGHDCGHGSFSN KLNS VGH++HS +L PY Sbjct: 22 FDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPY 126 HSP 2 Score: 30.0314 bits (66), Expect = 7.948e-35 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVE DE+W P++EK Sbjct: 138 QNHGHVEKDESWVPLTEK 155
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.454e-33 Identity = 62/105 (59.05%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYWAA GT+FWA+FVLGHDCGHGSFS+ LNSVVGH++HS +L PY Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPY 130 HSP 2 Score: 30.4166 bits (67), Expect = 1.454e-33 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVENDE+W P+ E+ Sbjct: 142 QNHGHVENDESWVPLPER 159
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.894e-33 Identity = 61/105 (58.10%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYW A GT+FWA+FVLGHDCGHGSFS+ LNSVVGH++HS +L PY Sbjct: 23 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPY 127 HSP 2 Score: 31.5722 bits (70), Expect = 1.894e-33 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + GHVENDE+W P+ EK Sbjct: 139 QNHGHVENDESWVPLPEK 156
BLAST of EY736146 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 9.245e-33 Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAXGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLVHSSMLGPY 671 FDP APPPF+LA+IR IPKHCWVKDP +S+SY PLYWA GTMFWA+FVLGHDCGHGSFS+ LN+VVGH++HS++L PY Sbjct: 22 FDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPY 126 HSP 2 Score: 26.5646 bits (57), Expect = 9.245e-33 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 706 EGDGHVENDEAWAPVSEK 759 + G+VE DE+W P+ EK Sbjct: 138 QNHGNVETDESWVPMPEK 155 The following BLAST results are available for this feature:
BLAST of EY736146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736146 ID=EY736146; Name=EY736146; organism=Citrus sinensis; type=EST; length=832bpback to top |