EY736132

Overview
NameEY736132
Unique NameEY736132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY736132_ssr758 microsatellite EY736132_ssr758:758..769. BLAST: Citrus ESTs to SwissProt
Homology
BLAST of EY736132 vs. ExPASy Swiss-Prot
Match: MGTE_THET8 (Magnesium transporter mgtE OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA1060 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.167e-15
Identity = 52/183 (28.42%), Postives = 90/183 (49.18%), Query Frame = -2
Query:    3 LAIVQADRDGDILLEVSDSVRETLIADMDDHELLAAAKDMDADELADLASELPRD---VVHELMETLDAQQRERVRSALSYDEEQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYEGILKGVLPIKRLLVNDPDKKVADVMASDPVSFHPDEDAYDAAQAFERYDLISAP 542
            L ++   +  ++L  +S   +   +  +    L    +++  D+LAD    + ++       L + LD + R  V +   Y+E++ G LM  E V +RE +++E VLR+LRR          ++VVD +G LKGVL ++ L+V DP  +VA++M    V    D D  + A+    YD    P
Sbjct:   49 LTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLP 231          
BLAST of EY736132 vs. ExPASy Swiss-Prot
Match: MGTE_ENTFA (Magnesium transporter mgtE OS=Enterococcus faecalis GN=mgtE PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 44/170 (25.88%), Postives = 87/170 (51.18%), Query Frame = -2
Query:    3 DILLEVSDSVRETLIADMDDHELLAAAKDMDADELADLASELPRDVVHELMETLDAQQRERVRSALSYDEEQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYEGILKGVLPIKRLLVNDPDKKVADVMASDPVSFHPDEDAYDAAQAFERYDLISAP 512
            D++ E ++++++ L A+M          +M  D   DL + L +    + +  L +++   ++  L Y++E  GA+M  E V+I  + ++   +  L+   ++      ++VVD E  L GV+ ++ L+VND D  +AD++    +S H  +D  D AQ    YD ++ P
Sbjct:   67 DVIEEDNENMKDYL-AEMRPSYAADMLAEMYTDNAVDLLNMLDKSQKAKYLSLLSSEEAGEIKELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVP 235          
BLAST of EY736132 vs. ExPASy Swiss-Prot
Match: MGTE_BACSU (Magnesium transporter mgtE OS=Bacillus subtilis GN=mgtE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.250e-13
Identity = 42/180 (23.33%), Postives = 93/180 (51.67%), Query Frame = -2
Query:    3 LAIVQADRDGDILLEVSDSVRETLIADMDDHELLAAAKDMDADELADLASELPRDVVHELMETLDAQQRERVRSALSYDEEQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYEGILKGVLPIKRLLVNDPDKKVADVMASDPVSFHPDEDAYDAAQAFERYDLISAP 542
            L+ +  D   D++ E+    +  ++  +   +   A   MD D+LA L  E+  ++  +L+ +++A + + V+  ++Y  +  G +M    V I +  +++  +  L+   E+    + L+V++    L GVL  + L++ +P++KV D+M +  +S    +D  + A+  ERYD ++ P
Sbjct:   54 LSYLTVDDITDMIGELEREFQLVVLNKVGKTKATLAMNKMDNDDLAQLLEEMDEELKEQLLSSMEASESKAVQLLMNYPADSAGRMMTNRYVWIPQHYTVKDAVVKLKSFAEIAESINYLYVINESKQLVGVLSYRDLILGEPEEKVQDLMFTRVISADALQDQEEVARLIERYDFLAIP 233          
The following BLAST results are available for this feature:
BLAST of EY736132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MGTE_THET81.167e-1528.42Magnesium transporter mgtE OS=Thermus thermophilus... [more]
MGTE_ENTFA4.905e-1425.88Magnesium transporter mgtE OS=Enterococcus faecali... [more]
MGTE_BACSU9.250e-1323.33Magnesium transporter mgtE OS=Bacillus subtilis GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-D01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736132 ID=EY736132; Name=EY736132; organism=Citrus sinensis; type=EST; length=834bp
ACCGGGGCCGAGATCAAGTCATAACGCTCGAACGCCTGGGCAGCGTCGTA
AGCGTCTTCGTCCGGATGGAAACTCACCGGGTCGCTGGCCATGACGTCCG
CGACTTTCTTGTCCGGGTCATTGACCAGCAGGCGCTTGATCGGCAGCACG
CCCTTGAGAATGCCTTCGTAATCGACCACGAACAGTTTGTCGGTGTGGCC
TGGCAGCTCCTTGAGGCGGCGCAGGTAACGCAGAACCACTTCCAGGCTGA
CGTCTTCGCGGATGGTGACCATCTCGAAGTCCATCAACGCACCGACCTGC
TCCTCGTCGTAGGACAACGCCGAGCGCACACGCTCACGCTGTTGGGCGTC
GAGGGTTTCCATCAGCTCATGGACGACGTCACGCGGCAGCTCGGAAGCCA
GGTCAGCGAGTTCGTCGGCATCCATGTCCTTGGCGGCAGCCAGGAGCTCG
TGATCGTCCATGTCGGCGATCAGGGTTTCACGGACCGAGTCGGATACTTC
AAGGAGGATGTCGCCGTCGCGATCGGCTTGAACAATTGCCAAAGCGTCAG
ACGGTCCATTAACGGCAAGCTTCGAGGATGTAAGGCACCTCCGGGAGAGT
GGCGGATCGCCAGCTGGGGTTGGCGCTCCGGGAAGTGTGGCCGGTGGGAG
CAGGCGCTCCGATCGGGTGGATAATTGGGCCCCCTGCGCCCGGTCCTCTC
GGTCTTGCGCATACTCGGGGCGGCTCTTGTCGTTGGGCGGAGGGTGGCCT
GGCGTCCGCGGCGGCGGCGCCGGGCCGCGCGGCGCTCTCATGTGTGTGGT
AGAGTGTGCCCCCGCCCGTCCCTTGGAGCGGCCG
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