EY736130

Overview
NameEY736130
Unique NameEY736130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB_MAIZE (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.147e-62
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 2
Query:   14 MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVN+FL+VAEEVR  LAQL Y KLDD+IGRTD
Sbjct: 1212 MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLFVAEEVRAALAQLGYEKLDDIIGRTD 1293          

HSP 2 Score: 101.679 bits (252), Expect = 9.147e-62
Identity = 50/84 (59.52%), Postives = 64/84 (76.19%), Query Frame = 1
Query:  259 LFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            L KP+ ISLVKTQH+DL Y+LS+ GLPEWSS++IR+QDVHTNGPVLDE +LA  +I+DA+E EK V +   I  V   V  R++
Sbjct: 1294 LLKPKHISLVKTQHIDLGYLLSNAGLPEWSSSQIRSQDVHTNGPVLDETILADPEIADAIENEKEVSKAFQIYNVDRAVCGRVA 1377          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB_SPIOL (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 1.556e-61
Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 2
Query:   14 MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRG+LAQL + KLDD+IGRTD
Sbjct: 1115 MGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGILAQLGFEKLDDIIGRTD 1196          

HSP 2 Score: 97.8265 bits (242), Expect = 1.556e-61
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 1
Query:  259 LFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            + KPRDISL+KTQHLDLSYIL+  GLP  SST IR Q+VHTNGPVLD+ +L+  +I DA+E EK+V++T  I  V   V  RI+
Sbjct: 1197 ILKPRDISLMKTQHLDLSYILASAGLPTMSSTAIRKQEVHTNGPVLDDQILSDPEIIDAIENEKIVNKTVKIFNVDRAVCGRIA 1280          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB1_ARATH (Ferredoxin-dependent glutamate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.693e-60
Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 2
Query:   14 MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            MGADEYGFGS+AMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVN+FLYVAEEVRG+LAQL Y  LDD+IGRT+
Sbjct: 1246 MGADEYGFGSLAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYNSLDDIIGRTE 1327          

HSP 2 Score: 97.8265 bits (242), Expect = 1.693e-60
Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  250 KNRLFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            +  L +PRDISLVKTQHLDLSY+LS VG P  SSTEIR Q+VHTNGPVLD+ +LA   + DA+E EKVV +T  I  V      R++
Sbjct: 1325 RTELLRPRDISLVKTQHLDLSYLLSSVGTPSLSSTEIRKQEVHTNGPVLDDDILADPLVIDAIENEKVVEKTVKICNVDRAACGRVA 1411          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB2_ARATH (Ferredoxin-dependent glutamate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.380e-60
Identity = 73/82 (89.02%), Postives = 80/82 (97.56%), Query Frame = 2
Query:   14 MGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            MGADEYGFG++AMIATGC+MARICHTNNCPVGVASQREELRARFPG+PGDLVNFFLY+AEEVRG+LAQL Y KLDD+IGRTD
Sbjct: 1222 MGADEYGFGTLAMIATGCIMARICHTNNCPVGVASQREELRARFPGLPGDLVNFFLYIAEEVRGILAQLGYEKLDDIIGRTD 1303          

HSP 2 Score: 93.9745 bits (232), Expect = 6.380e-60
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 1
Query:  259 LFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            L K RDISLVKT HLDLSY+LS VGLP+ SST IR Q+VH+NGPVLD+ LL   +I DA+E EK VH+T  I  V  +V  RI+
Sbjct: 1304 LLKARDISLVKT-HLDLSYLLSSVGLPKRSSTSIRKQEVHSNGPVLDDTLLQDPEIMDAIENEKTVHKTMSIYNVDRSVCGRIA 1386          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB_ANTSP (Ferredoxin-dependent glutamate synthase OS=Antithamnion sp. GN=gltB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.719e-40
Identity = 58/83 (69.88%), Postives = 75/83 (90.36%), Query Frame = 2
Query:   11 VMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            +MGA+E+GFG+VAMIATGCVMAR+CHTNNCPVGVA+QR++LR RFPG+P D+VNFF++VAEEVR +LA+L Y  L+++IG  D
Sbjct: 1140 LMGAEEFGFGTVAMIATGCVMARVCHTNNCPVGVATQRQDLRNRFPGIPSDVVNFFIFVAEEVREILAELGYKSLEELIGLND 1222          

HSP 2 Score: 53.5286 bits (127), Expect = 6.719e-40
Identity = 29/86 (33.72%), Postives = 53/86 (61.63%), Query Frame = 1
Query:  253 NRLFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            N LFK +DI L KT++L+L+ + + + +      +++++ VHTNG VLD++LL+ ++I +A+  +  + +   I      V ARIS
Sbjct: 1221 NDLFKVKDIELSKTKNLNLNILFNSINMNRNLIPKLKHKTVHTNGNVLDDILLSKSNIINAINLQSNIVQDIEILNTDRCVGARIS 1306          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTS_SYNY3 (Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gltS PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 4.280e-39
Identity = 60/83 (72.29%), Postives = 72/83 (86.75%), Query Frame = 2
Query:   11 VMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            +MGA+EYGFGS+AMIA GC+MAR+CHTNNCPVGVA+Q+E LR RF GVPG +VNFF ++AEEVR +LA L Y  LDD+IGRTD
Sbjct: 1155 LMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTD 1237          

HSP 2 Score: 47.3654 bits (111), Expect = 4.280e-39
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 1
Query:  274 DISLVKTQHLDLSYILSDVGLPEWSSTE--IRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARISDA 516
            D+ L KTQ+L L  +L+   LP+       + ++ VH+NGPVLD+ +LA  DI +A+ ++    +T  +     TV  R+S A
Sbjct: 1244 DVQLSKTQNLTLDCLLN---LPDTKQNRQWLNHEPVHSNGPVLDDDILADPDIQEAINHQTTATKTYRLVNTDRTVGTRLSGA 1323          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB_PORPU (Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea GN=gltB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.029e-36
Identity = 57/89 (64.04%), Postives = 71/89 (79.78%), Query Frame = 2
Query:   11 VMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTDCSSRGT 277
            +MGA+E+GFG++AMIATGC+MARICHTN CPVGVA+QREELRARF GVP  LVNFFL++  EVR +LA L Y  LD++ G+     + T
Sbjct: 1144 IMGAEEFGFGTIAMIATGCIMARICHTNKCPVGVATQREELRARFSGVPEALVNFFLFIGNEVREILASLGYKSLDEITGQNHLLIKNT 1232          

HSP 2 Score: 46.9802 bits (110), Expect = 7.029e-36
Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 1
Query:  259 LFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            L K  DI L KT+ ++L+ +++ +    W+    +   VHTNGPV+D+ +LA  +I+DA++ E  V +   I     TV  R+S
Sbjct: 1228 LIKNTDIELAKTRGIELNSLIN-INTHTWT----KFNSVHTNGPVMDDDILAIPEINDAIKLENEVAKHFKIANTNRTVGTRLS 1306          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB_PORYE (Ferredoxin-dependent glutamate synthase OS=Porphyra yezoensis GN=gltB PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.635e-35
Identity = 59/89 (66.29%), Postives = 71/89 (79.78%), Query Frame = 2
Query:   11 VMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTDCSSRGT 277
            +MGA+E+GFG+VAMIATGC+MARICHTN CPVGVA+QREELRARF GVP  LVNFFL++  EVR +LA L Y  LDD+ G+     + T
Sbjct: 1144 IMGAEEFGFGTVAMIATGCIMARICHTNKCPVGVATQREELRARFSGVPEALVNFFLFIGNEVREILASLGYKSLDDITGQNHLLIKNT 1232          

HSP 2 Score: 43.1282 bits (100), Expect = 2.635e-35
Identity = 27/84 (32.14%), Postives = 46/84 (54.76%), Query Frame = 1
Query:  259 LFKPRDISLVKTQHLDLSYILSDVGLPEWSSTEIRNQDVHTNGPVLDEVLLAYADISDALEYEKVVHETCPI*CVASTVFARIS 510
            L K  DI+L KT  + L  +++ +    W+    +   VHTNGPV+D+ +LA  ++S+A++ E  + +   I     TV  R+S
Sbjct: 1228 LIKNTDINLTKTNGIQLDTLIN-INNNTWT----KFNSVHTNGPVMDDDILAIPEVSNAIKLETEITKHFKIANTNRTVGTRLS 1306          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLTB_CYACA (Ferredoxin-dependent glutamate synthase OS=Cyanidium caldarium GN=gltB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.090e-27
Identity = 51/83 (61.45%), Postives = 73/83 (87.95%), Query Frame = 2
Query:   11 VMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            ++GADEYGFG++AMIA GC+MAR+CHTN+CPVGVA+Q+EELR R+PGVP ++VN+F+++AEE+R +L++L +  L  +IGR D
Sbjct: 1151 LLGADEYGFGTIAMIAGGCIMARVCHTNSCPVGVATQKEELRMRYPGVPENVVNYFIFLAEEIRVILSKLGFETLSQIIGRKD 1233          
BLAST of EY736130 vs. ExPASy Swiss-Prot
Match: GLT1_SCHPO (Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe GN=SPAPB1E7.07 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.757e-21
Identity = 42/83 (50.60%), Postives = 64/83 (77.11%), Query Frame = 2
Query:   11 VMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNFFLYVAEEVRGMLAQLRYAKLDDVIGRTD 259
            ++GA+E+GF +  +IA GC+M R CH N CPVG+A+Q  ELR +F G P  +VNFF YVAEE+RG++A+L +  +++++GR+D
Sbjct: 1174 LLGAEEWGFATTPLIALGCIMMRKCHLNTCPVGIATQDPELRKKFEGQPEHVVNFFYYVAEELRGIMAKLGFRTINEMVGRSD 1256          
The following BLAST results are available for this feature:
BLAST of EY736130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GLTB_MAIZE9.147e-6291.46Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB_SPIOL1.556e-6192.68Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB1_ARATH1.693e-6090.24Ferredoxin-dependent glutamate synthase 1, chlorop... [more]
GLTB2_ARATH6.380e-6089.02Ferredoxin-dependent glutamate synthase 2, chlorop... [more]
GLTB_ANTSP6.719e-4069.88Ferredoxin-dependent glutamate synthase OS=Antitha... [more]
GLTS_SYNY34.280e-3972.29Ferredoxin-dependent glutamate synthase 2 OS=Synec... [more]
GLTB_PORPU7.029e-3664.04Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLTB_PORYE2.635e-3566.29Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLTB_CYACA4.090e-2761.45Ferredoxin-dependent glutamate synthase OS=Cyanidi... [more]
GLT1_SCHPO9.757e-2150.60Putative glutamate synthase [NADPH] OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736130 ID=EY736130; Name=EY736130; organism=Citrus sinensis; type=EST; length=867bp
CACGCGTCCGGTAATGGGTGCTGATGAATATGGATTTGGTTCTGTGGCAA
TGATTGCTACTGGATGTGTTATGGCCCGCATTTGCCATACAAACAATTGC
CCAGTTGGGGTTGCCAGTCAAAGAGAAGAACTGCGTGCACGATTTCCTGG
TGTGCCTGGTGATCTTGTTAATTTTTTCCTTTATGTAGCTGAGGAGGTTA
GAGGCATGTTGGCACAACTGCGTTATGCGAAGTTGGATGATGTAATTGGA
AGAACAGATTGTTCAAGCCGCGGGACATCTCACTAGTGAAAACTCAGCAT
CTTGATCTCAGTTATATTCTCTCAGATGTTGGATTGCCAGAATGGAGCAG
TACGGAAATAAGGAATCAAGATGTTCATACGAATGGGCCTGTACTGGATG
AGGTATTGCTTGCATATGCTGATATATCTGATGCACTTGAATATGAGAAA
GTGGTTCACGAAACCTGTCCGATATAGTGTGTGGCATCGACTGTATTTGC
CCGTATATCGGATGCCAGCCCTACCAATCAGTACCCCCTGCGTCTTCAGG
GCAGCGCAACCGCAGCCTTTGCCGGGGGCGCGGGAGAGGCGAAGGGCGTG
CCTCAAAACCCCGCGGGCACCAACTTCACCCGCGGCTGAGCCGGGACCTG
CTTGTCTCTCTTCCTCCGGGTCGGGCCAGCCGTGGGAGTACTGGCCCCGC
GGGGCGAGGCGGAGTGCCGTGAGGAGCGCGGAGTGGCGGGCGGTAAAGCA
CTAAGCGCGCCCGCGCCCTCCTCCTCCCCGGGCGCCCGACGGATCCACGA
CACCCACGCCACGCCCCCCGCGCCGCGGCCGGCACGGGGGCCGCGGCGGG
CAGGACGGGGGAGCGAG
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