EY736128

Overview
NameEY736128
Unique NameEY736128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE1_ARATH (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana GN=At1g30630 PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 9.441e-99
Identity = 174/219 (79.45%), Postives = 198/219 (90.41%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            V+LLA+YLSSP+NKESTISSL+EWL+DP +G+NA +RLIAG IFMHEEDYNEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLR MQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIFQDFSEKYPMT LILNGKAVCCMHMGNF+EAE             PETLANLVVCSLH GKS+SRYLNQLKL+HP+H+LVKRA+S +++FERALQS A
Sbjct:   74 VKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE2_ARATH (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana GN=At2g34840 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.843e-94
Identity = 170/219 (77.63%), Postives = 194/219 (88.58%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            V+LLA+YLS+P NKESTISSLKEWL+D  IG+N TLRLIAGIIFMHEEDYNE LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLR MQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIF+DFSEKYPMT LILNGKAVCCM MGNFDEAE             PETLANLVVCSLH GKS+SR+L+QLKL+HP+H+LVKR SS +++FERA+Q VA
Sbjct:   75 VKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE1_ORYSJ (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica GN=COPE1 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.460e-91
Identity = 164/219 (74.89%), Postives = 192/219 (87.67%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            V+LLALYLS   +KES I SLKEWLSD A+GSN  LRLIAGIIFMHE+DY EALKHT++GGT++LHALNVQIF+KMHRSDYAE+QL+ MQQIDEDHTLTQLANAWL++AVGGSKI+EAYLIFQDF+EKYPMTG++LNGKAVCCMHMG+FDEAE             PETLANL+VC+LH GK +SRYL+QLKL+HPDH+LVKRA S +++FERALQ+VA
Sbjct:   71 VKLLALYLSG--DKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDAKDPETLANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSI (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica GN=H0413E07.10 PE=3 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 2.187e-79
Identity = 150/220 (68.18%), Postives = 175/220 (79.55%), Query Frame = 3
Query:    6 VRLLALYLSS-PDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            VRLLA+YLS     KES I  L E L+D A+GSN  LRL+AG + MHE DY  ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR MQQ+DEDHTLTQLANAW++L +GGSKIQEA+LIFQD SEKYP T LILNGKA+C MHMGNF++AEG             ETLANLVVCSL+ GKS SRYLNQLKL HPDHMLVKR SS ++SF+RA Q+++
Sbjct:   78 VRLLAVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSJ (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica GN=Os04g0644700 PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.362e-79
Identity = 149/220 (67.73%), Postives = 174/220 (79.09%), Query Frame = 3
Query:    6 VRLLALYLSS-PDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            VRLL +YLS     KES I  L E L+D A+GSN  LRL+AG + MHE DY  ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR MQQ+DEDHTLTQLANAW++L +GGSKIQEA+LIFQD SEKYP T LILNGKA+C MHMGNF++AEG             ETLANLVVCSL+ GKS SRYLNQLKL HPDHMLVKR SS ++SF+RA Q+++
Sbjct:   78 VRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE_CHICK (Coatomer subunit epsilon OS=Gallus gallus GN=COPE PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.810e-41
Identity = 89/222 (40.09%), Postives = 135/222 (60.81%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            VR+ A YLS+   +++ ++ L + ++     +N T  L+A  I+ H+++ + AL+  + G ++E  A+ +QI LK+ R D A ++L+ MQ+ DED TLTQLA AW+NLA+GG K+Q+AY IFQ+ ++K   T L+LNG+A C M  G +D+AEG            PETL N VV S H GK    T+RYL+QLK  H +H  +K   + +  F+R     A
Sbjct:   84 VRMFAEYLSNESQRDAIVADLDKKMAKSVDVANTTFLLMAASIYFHDKNPDAALRTLHQGESLECMAMMIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLAIGGEKLQDAYYIFQEMADKCSSTLLLLNGQAACYMAQGKWDDAEGVLQEALDKDSGHPETLINFVVLSQHLGKPPEVTNRYLSQLKDAHKNHPFIKEYQAKENDFDRLAMQYA 305          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE_PONAB (Coatomer subunit epsilon OS=Pongo abelii GN=COPE PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 89/222 (40.09%), Postives = 133/222 (59.91%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            VR+ A YL+    ++S ++ L   +S     +N T  L+A  I++H+++ + AL+  + G ++E  A+ VQI LK+ R D A ++L+ MQ +DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K   T L+LNG+A C M  G ++ AEG            PETL NL+V S H GK    T+RYL+QLK  H  H  +K   + +  F+R +   A
Sbjct:   84 VRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYA 305          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE_HUMAN (Coatomer subunit epsilon OS=Homo sapiens GN=COPE PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 89/222 (40.09%), Postives = 133/222 (59.91%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            VR+ A YL+    ++S ++ L   +S     +N T  L+A  I++H+++ + AL+  + G ++E  A+ VQI LK+ R D A ++L+ MQ +DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K   T L+LNG+A C M  G ++ AEG            PETL NL+V S H GK    T+RYL+QLK  H  H  +K   + +  F+R +   A
Sbjct:   84 VRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYA 305          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE_MOUSE (Coatomer subunit epsilon OS=Mus musculus GN=Cope PE=2 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 3.413e-40
Identity = 91/222 (40.99%), Postives = 130/222 (58.56%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 662
            VR+ A YL+S + ++S +  L   +S     +N T  L+A  I+ H+++ + AL+  + G  +E  A+ +QI LK+ R D A ++L+ MQ  DED TLTQLA AW+NLAVGG K+QEAY IFQ+ ++K   T L+LNG+A C    G ++ AEG            PETL NL+V S H GK    T+RYL+QLK  H  H  +K   + +  F+R     A
Sbjct:   84 VRMFAEYLASENQRDSIVLELDREMSRSVDVTNTTFLLMAASIYFHDQNPDAALRTLHQGDGLECMAMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQAACHSAQGRWETAEGVLQEALDKDSGHPETLINLIVLSQHLGKPPEVTNRYLSQLKDAHRAHPFIKEYQAKENDFDRLAMQYA 305          
BLAST of EY736128 vs. ExPASy Swiss-Prot
Match: COPE_CRIGR (Coatomer subunit epsilon OS=Cricetulus griseus GN=COPE PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 9.930e-40
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 3
Query:    6 VRLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXXPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFER-ALQ 653
            VR+ A YL++ + +++ +  L   +S     +N T  L+A  ++ H+++ + AL+  + G ++E  A+ +QI LK+ R D A ++L+ MQ  DED TLTQLA AW+NLAVGG K+QEAY IFQ+ ++K   T L+LNG+A C    G ++ AEG            PETL NL+V S H GK    T+RYL+QLK  H  H  +K   + +  F+R ALQ
Sbjct:   84 VRMFADYLATENRRDAIVVELDREMSRSVDVTNTTFLLMAASVYFHDQNPDAALRTLHQGDSLECMAMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQAACHSAQGRWETAEGVLQEALDKDSGHPETLINLIVLSQHLGKPPEVTNRYLSQLKDAHRTHPFIKEYQAKENDFDRLALQ 303          
The following BLAST results are available for this feature:
BLAST of EY736128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
COPE1_ARATH9.441e-9979.45Coatomer subunit epsilon-1 OS=Arabidopsis thaliana... [more]
COPE2_ARATH1.843e-9477.63Coatomer subunit epsilon-2 OS=Arabidopsis thaliana... [more]
COPE1_ORYSJ1.460e-9174.89Coatomer subunit epsilon-1 OS=Oryza sativa subsp. ... [more]
COPE2_ORYSI2.187e-7968.18Coatomer subunit epsilon-2 OS=Oryza sativa subsp. ... [more]
COPE2_ORYSJ6.362e-7967.73Coatomer subunit epsilon-2 OS=Oryza sativa subsp. ... [more]
COPE_CHICK1.810e-4140.09Coatomer subunit epsilon OS=Gallus gallus GN=COPE ... [more]
COPE_PONAB1.173e-4040.09Coatomer subunit epsilon OS=Pongo abelii GN=COPE P... [more]
COPE_HUMAN1.173e-4040.09Coatomer subunit epsilon OS=Homo sapiens GN=COPE P... [more]
COPE_MOUSE3.413e-4040.99Coatomer subunit epsilon OS=Mus musculus GN=Cope P... [more]
COPE_CRIGR9.930e-4040.91Coatomer subunit epsilon OS=Cricetulus griseus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736128 ID=EY736128; Name=EY736128; organism=Citrus sinensis; type=EST; length=896bp
CACGCGTCCGGTTGCTTGCTCTCTATCTCTCTAGCCCTGACAACAAGGAA
TCAACAATTTCAAGTTTAAAAGAGTGGTTGTCAGATCCAGCCATTGGGAG
CAATGCGACATTACGCTTGATTGCTGGTATCATATTCATGCATGAAGAGG
ATTATAATGAGGCACTCAAACACACCAATGCTGGAGGGACCATGGAATTA
CATGCATTGAATGTCCAAATATTCCTTAAGATGCACAGGTCTGACTATGC
AGAGAGACAGCTGAGGGCCATGCAACAGATTGATGAGGACCACACCCTAA
CTCAACTTGCAAATGCTTGGTTGAATTTGGCAGTGGGTGGTTCCAAGATA
CAGGAAGCATATCTCATCTTTCAAGATTTCTCTGAGAAGTATCCAATGAC
AGGGTTGATCTTGAATGGAAAGGCTGTTTGCTGCATGCATATGGGGAACT
TTGATGAAGCTGAAGGATTGTTGCTTGATGCACTCAACAAGGATGCTAAA
GATCCAGAAACTCTTGCCAACCTGGTTGTATGCAGTCTTCACCAAGGAAA
ATCAACTTCACGTTACCTCAACCAGTTGAAGCTTACACACCCAGACCACA
TGCTTGTCAAGCGTGCTTCATCCGGAGATGAGAGCTTTGAAAGAGCACTT
CAATCTGTTGCCTGAAAACTAGAGTCATTTTGGGGGCAAGAGGTGAATGA
TTTCTGTAAACTACAAGAGAAGTATATGATTGATTTGAAAGATGGTGTTT
GTCAGCATAAAGTTGGGTATCTACCCTTTTTGAAATCTTGGAATAAAGAA
TCCTCTCCATATGTTAAATATTCCAAGAAATTCATCTTTTGTCCGGTTTG
GTGGGTTTGGGGGGGGGGAATATATTCTTCCGGGGGGGGAGGGGGG
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